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Sequence alignment

Identifying and Seeing beyond Multiple Sequence Alignment Errors Using Intra-Molecular Protein Covariation

Russell J. Dickson, Lindi M. Wahl, Andrew D. Fernandes, Gregory B. Gloor

progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement

Aaron E. Darling, Bob Mau, Nicole T. Perna

Characterization of S3Pvac Anti-Cysticercosis Vaccine Components: Implications for the Development of an Anti-Cestodiasis Vaccine

Dunia Rassy, Raúl J. Bobes, [ ... ], Edda Sciutto

Towards the Rational Design of a Candidate Vaccine against Pregnancy Associated Malaria: Conserved Sequences of the DBL6ε Domain of VAR2CSA

Cyril Badaut, Gwladys Bertin, [ ... ], Philippe Deloron

Molecular Cloning and Gene Expression Analysis of the Leptin Receptor in the Chinese Mitten Crab Eriocheir sinensis

Hui Jiang, Fei Ren, [ ... ], Qun Wang

Employing Information Theoretic Measures and Mutagenesis to Identify Residues Critical for Drug-Proton Antiport Function in Mdr1p of Candida albicans

Khyati Kapoor, Mohd Rehan, Andrew M. Lynn, Rajendra Prasad

Slip-Sliding Away: Serial Changes and Homoplasy in Repeat Number in the Drosophila yakuba Homolog of Human Cancer Susceptibility Gene BRCA2

Sarah M. Bennett, John M. Mercer, Mohamed A. F. Noor

De Novo Assembly of the Complete Genome of an Enhanced Electricity-Producing Variant of Geobacter sulfurreducens Using Only Short Reads

Harish Nagarajan, Jessica E. Butler, [ ... ], Christian L. Barrett

W-Curve Alignments for HIV-1 Genomic Comparisons

Douglas J. Cork, Steven Lembark, [ ... ], Jerome H. Kim

Validation of Coevolving Residue Algorithms via Pipeline Sensitivity Analysis: ELSC and OMES and ZNMI, Oh My!

Christopher A. Brown, Kevin S. Brown

Identification of Novel Pathogenicity Loci in Clostridium perfringens Strains That Cause Avian Necrotic Enteritis

Dion Lepp, Bryan Roxas, [ ... ], John F. Prescott

Allelic Gene Structure Variations in Anopheles gambiae Mosquitoes

Jun Li, Jose M. C. Ribeiro, Guiyun Yan

Characterization of a Group of MITEs with Unusual Features from Two Coral Genomes

Shi Wang, Lingling Zhang, Eli Meyer, Mikhail V. Matz

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