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Sequence alignment

Large Scale Loss of Data in Low-Diversity Illumina Sequencing Libraries Can Be Recovered by Deferred Cluster Calling

Felix Krueger, Simon R. Andrews, Cameron S. Osborne

Structural Analysis of Alkaline β-Mannanase from Alkaliphilic Bacillus sp. N16-5: Implications for Adaptation to Alkaline Conditions

Yueju Zhao, Yunhua Zhang, [ ... ], Yanhe Ma

Parallel Expansions of Sox Transcription Factor Group B Predating the Diversifications of the Arthropods and Jawed Vertebrates

Lei Zhong, Dengqiang Wang, [ ... ], Shunping He

Microbial Diversity of a Brazilian Coastal Region Influenced by an Upwelling System and Anthropogenic Activity

Juliano C. Cury, Fabio V. Araujo, [ ... ], Alexandre S. Rosado

Use of rbcL and trnL-F as a Two-Locus DNA Barcode for Identification of NW-European Ferns: An Ecological Perspective

G. Arjen de Groot, Heinjo J. During, [ ... ], Roy H. J. Erkens

Species Delimitation in Taxonomically Difficult Fungi: The Case of Hymenogaster

Benjamin Stielow, Zoltan Bratek, [ ... ], Markus Göker

Specific Binding of the Pathogenic Prion Isoform: Development and Characterization of a Humanized Single-Chain Variable Antibody Fragment

Nives Škrlj, Tanja Vranac, [ ... ], Marko Dolinar

Evolutionary and Structural Features of the C2, V3 and C3 Envelope Regions Underlying the Differences in HIV-1 and HIV-2 Biology and Infection

Helena Barroso, Pedro Borrego, [ ... ], Nuno Taveira

Genome-Wide Polymorphism and Comparative Analyses in the White-Tailed Deer (Odocoileus virginianus): A Model for Conservation Genomics

Christopher M. Seabury, Eric K. Bhattarai, [ ... ], Paul M. Seabury

Characterization of the Deleted in Autism 1 Protein Family: Implications for Studying Cognitive Disorders

Azhari Aziz, Sean P. Harrop, Naomi E. Bishop

PoPoolation: A Toolbox for Population Genetic Analysis of Next Generation Sequencing Data from Pooled Individuals

Robert Kofler, Pablo Orozco-terWengel, [ ... ], Christian Schlötterer

Antarctic Krill 454 Pyrosequencing Reveals Chaperone and Stress Transcriptome

Melody S. Clark, Michael A. S. Thorne, [ ... ], Stephen Moore

Sequence Alignment, Mutual Information, and Dissimilarity Measures for Constructing Phylogenies

Orion Penner, Peter Grassberger, Maya Paczuski

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