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Sequence alignment

Inferring Phylogenies from RAD Sequence Data

Benjamin E. R. Rubin, Richard H. Ree, Corrie S. Moreau

published 06 Apr 2012

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Alternative Splicing of a Multi-Drug Transporter from Pseudoperonospora cubensis Generates an RXLR Effector Protein That Elicits a Rapid Cell Death

Elizabeth A. Savory, Cheng Zou, Bishwo N. Adhikari, John P. Hamilton, C. Robin Buell, Shin-Han Shiu, Brad Day

published 05 Apr 2012

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Alignment-Free Design of Highly Discriminatory Diagnostic Primer Sets for Escherichia coli O104:H4 Outbreak Strains

Leighton Pritchard, Nicola J. Holden, Martina Bielaszewska, Helge Karch, Ian K. Toth

published 05 Apr 2012

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A Family-Wide RT-PCR Assay for Detection of Paramyxoviruses and Application to a Large-Scale Surveillance Study

Sander van Boheemen, Theo M. Bestebroer, Josanne H. Verhagen, Albert D. M. E. Osterhaus, Suzan D. Pas, Sander Herfst, Ron A. M. Fouchier

published 04 Apr 2012

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Fast and Accurate Taxonomic Assignments of Metagenomic Sequences Using MetaBin

Vineet K. Sharma, Naveen Kumar, Tulika Prakash, Todd D. Taylor

published 04 Apr 2012

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Skip the Alignment: Degenerate, Multiplex Primer and Probe Design Using K-mer Matching Instead of Alignments

David A. Hysom, Pejman Naraghi-Arani, Maher Elsheikh, A. Celena Carrillo, Peter L. Williams, Shea N. Gardner

published 02 Apr 2012

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The Hydrophobic Core of Twin-Arginine Signal Sequences Orchestrates Specific Binding to Tat-Pathway Related Chaperones

Anitha Shanmugham, Adil Bakayan, Petra Völler, Joost Grosveld, Holger Lill, Yves J. M. Bollen

published 30 Mar 2012

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Molecular Evolution of the Neuropeptide S Receptor

Thejkiran Pitti, Narayanan Manoj

published 30 Mar 2012

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Computational Characterization of 3′ Splice Variants in the GFAP Isoform Family

Sarah E. Boyd, Betina Nair, Sze Woei Ng, Jonathan M. Keith, Jacqueline M. Orian

published 30 Mar 2012

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Composition and Evolution of the Vertebrate and Mammalian Selenoproteomes

Marco Mariotti, Perry G. Ridge, Yan Zhang, Alexei V. Lobanov, Thomas H. Pringle, Roderic Guigo, Dolph L. Hatfield, Vadim N. Gladyshev

published 30 Mar 2012

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Functional Validation of Hydrophobic Adaptation to Physiological Temperature in the Small Heat Shock Protein αA-crystallin

Mason Posner, Andor J. Kiss, Jackie Skiba, Amy Drossman, Monika B. Dolinska, J. Fielding Hejtmancik, Yuri V. Sergeev

published 29 Mar 2012

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Analysis of Immunoglobulin Transcripts in the Ostrich Struthio camelus, a Primitive Avian Species

Tian Huang, Min Zhang, Zhiguo Wei, Ping Wang, Yi Sun, Xiaoxiang Hu, Liming Ren, Qingyong Meng, Ran Zhang, Ying Guo, Lennart Hammarstrom, Ning Li, Yaofeng Zhao

published 29 Mar 2012

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Exploring the Switchgrass Transcriptome Using Second-Generation Sequencing Technology

Yixing Wang, Xin Zeng, Niranjani J. Iyer, Douglas W. Bryant, Todd C. Mockler, Ramamurthy Mahalingam

published 29 Mar 2012

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