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Sequence alignment

Rapid and specific detection of wheat spindle streak mosaic virus using RT-LAMP in durum wheat crude leaf extract

Monica Marra, Paolo Mussano, Eugenio Pinton, Cinzia Montemurro, Elena Baldoni, Claudio Ratti, Slavica Matić, Chiara D’Errico, Gian Paolo Accotto

published 29 Feb 2024

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Assigning the unassigned: A signature-based classification of rDNA metabarcodes reveals new deep-sea diversity

Inès Barrenechea Angeles, Ngoc-Loi Nguyen, Mattia Greco, Koh Siang Tan, Jan Pawlowski

published 29 Feb 2024

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Enzymatic properties of UDP-glycosyltransferase 89B1 from radish and modulation of enzyme catalytic activity via loop region mutation

Hiroyuki Ohashi, Daisuke Koma, Hayato Yamanaka, Takashi Ohmoto

published 28 Feb 2024

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Ultra-dense Motion Capture: An exploratory full-automatic approach for dense tracking of breast motion in 4D

Qi-long Liu, Kit-lun Yick, Yue Sun, Joanne Yip

published 26 Feb 2024

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Barcoding and mitochondrial phylogenetics of Porites corals

David J. Combosch, David Burdick, Karim Primov, Dareon Rios, Kireon Rios, Jessica Fernandez

published 15 Feb 2024

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Distinguishing characteristics of Staphylococcus schleiferi and Staphylococcus coagulans of human and canine origin

Alaa H. Sewid, Stephen A. Kania

published 08 Feb 2024

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Metagenomic analyses of 7000 to 5500 years old coprolites excavated from the Torihama shell-mound site in the Japanese archipelago

Luca Nishimura, Akio Tanino, Mayumi Ajimoto, Takafumi Katsumura, Motoyuki Ogawa, Kae Koganebuchi, Daisuke Waku, Masahiko Kumagai, Ryota Sugimoto, Hirofumi Nakaoka, Hiroki Oota, Ituro Inoue

published 24 Jan 2024

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A missense mutation in the highly conserved TNF-like domain of Ectodysplasin A is the candidate causative variant for X-linked hypohidrotic ectodermal dysplasia in Limousin cattle: Clinical, histological, and molecular analyses

Frederik Krull, Martina Bleyer, Jana Schäfer, Bertram Brenig

published 22 Jan 2024

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Machine learning-based approach KEVOLVE efficiently identifies SARS-CoV-2 variant-specific genomic signatures

Dylan Lebatteux, Hugo Soudeyns, Isabelle Boucoiran, Soren Gantt, Abdoulaye Baniré Diallo

published 19 Jan 2024

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Finding Candida auris in public metagenomic repositories

Jorge E. Mario-Vasquez, Ujwal R. Bagal, Elijah Lowe, Aleksandr Morgulis, John Phan, D. Joseph Sexton, Sergey Shiryev, Rytis Slatkevičius, Rory Welsh, Anastasia P. Litvintseva, Matthew Blumberg, Richa Agarwala, Nancy A. Chow

published 19 Jan 2024

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Kuura—An automated workflow for analyzing WES and WGS data

Dhanaprakash Jambulingam, Venkat Subramaniam Rathinakannan, Samuel Heron, Johanna Schleutker, Vidal Fey

published 18 Jan 2024

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AutoPhy: Automated phylogenetic identification of novel protein subfamilies

Adrian N. Ortiz-Velez, Jeet Sukumaran, Ryin Rouzbehani, Scott T. Kelley

published 11 Jan 2024

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SVvalidation: A long-read-based validation method for genomic structural variation

Yan Zheng, Xuequn Shang

published 05 Jan 2024

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