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Sequence alignment

The Complete Genome Sequence of Escherichia coli EC958: A High Quality Reference Sequence for the Globally Disseminated Multidrug Resistant E. coli O25b:H4-ST131 Clone

Brian M. Forde, Nouri L. Ben Zakour, [ ... ], Scott A. Beatson

Comparative Analysis of Functional Metagenomic Annotation and the Mappability of Short Reads

Rogan Carr, Elhanan Borenstein

Intergenomic Comparisons Highlight Modularity of the Denitrification Pathway and Underpin the Importance of Community Structure for N₂O Emissions

Daniel R. H. Graf, Christopher M. Jones, Sara Hallin

Transposable Elements in TDP-43-Mediated Neurodegenerative Disorders

Wanhe Li, Ying Jin, [ ... ], Josh Dubnau

Next Generation Sequencing to Define Prokaryotic and Fungal Diversity in the Bovine Rumen

Derrick E. Fouts, Sebastian Szpakowski, [ ... ], Karen E. Nelson

A Family-Wide RT-PCR Assay for Detection of Paramyxoviruses and Application to a Large-Scale Surveillance Study

Sander van Boheemen, Theo M. Bestebroer, [ ... ], Ron A. M. Fouchier

RNA-Seq Profiling Reveals Novel Hepatic Gene Expression Pattern in Aflatoxin B1 Treated Rats

B. Alex Merrick, Dhiral P. Phadke, [ ... ], Raymond R. Tice

Predicting Target DNA Sequences of DNA-Binding Proteins Based on Unbound Structures

Chien-Yu Chen, Ting-Ying Chien, [ ... ], Darby Tien-Hao Chang

Advantages of an easy-to-use DNA extraction method for minimal-destructive analysis of collection specimens

Franziska Patzold, Alberto Zilli, Anna K. Hundsdoerfer

Assessing Phylogenetic Relationships among Galliformes: A Multigene Phylogeny with Expanded Taxon Sampling in Phasianidae

Ning Wang, Rebecca T. Kimball, [ ... ], Zhengwang Zhang

Single-Cell RNA-Seq of Bone Marrow-Derived Mesenchymal Stem Cells Reveals Unique Profiles of Lineage Priming

Brian T. Freeman, Jangwook P. Jung, Brenda M. Ogle

De Novo Transcriptome Assembly (NGS) of Curcuma longa L. Rhizome Reveals Novel Transcripts Related to Anticancer and Antimalarial Terpenoids

Ramasamy S. Annadurai, Ramprasad Neethiraj, [ ... ], Raja C. Mugasimangalam

Skip the Alignment: Degenerate, Multiplex Primer and Probe Design Using K-mer Matching Instead of Alignments

David A. Hysom, Pejman Naraghi-Arani, [ ... ], Shea N. Gardner

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