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Sequence alignment

CGAP-Align: A High Performance DNA Short Read Alignment Tool

Yaoliang Chen, Ji Hong, Wanyun Cui, Jacques Zaneveld, Wei Wang, Richard Gibbs, Yanghua Xiao, Rui Chen

published 11 Apr 2013

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Characterization of the Two Intra-Individual Sequence Variants in the 18S rRNA Gene in the Plant Parasitic Nematode, Rotylenchulus reniformis

Seloame T. Nyaku, Venkateswara R. Sripathi, Ramesh V. Kantety, Yong Q. Gu, Kathy Lawrence, Govind C. Sharma

published 11 Apr 2013

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DomHR: Accurately Identifying Domain Boundaries in Proteins Using a Hinge Region Strategy

Xiao-yan Zhang, Long-jian Lu, Qi Song, Qian-qian Yang, Da-peng Li, Jiang-ming Sun, Tong-hua Li, Pei-sheng Cong

published 11 Apr 2013

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MrBayes tgMC³: A Tight GPU Implementation of MrBayes

Cheng Ling, Tsuyoshi Hamada, Jianing Bai, Xianbin Li, Douglas Chesters, Weimin Zheng, Weifeng Shi

published 09 Apr 2013

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Revising a Personal Genome by Comparing and Combining Data from Two Different Sequencing Platforms

Deokhoon Kim, Woo-Yeon Kim, Sun-Young Lee, Sung-Yeoun Lee, Hongseok Yun, Soo-Yong Shin, Jungyoun Lee, Yoojin Hong, Youngmi Won, Seong-Jin Kim, Yong Seok Lee, Sung-Min Ahn

published 08 Apr 2013

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Interaction between HLA-DRB1-DQB1 Haplotypes in Sardinian Multiple Sclerosis Population

Eleonora Cocco, Raffaele Murru, Gianna Costa, Amit Kumar, Enrico Pieroni, Cristina Melis, Luigi Barberini, Claudia Sardu, Lorena Lorefice, Giuseppe Fenu, Jessica Frau, Giancarlo Coghe, Nicola Carboni, Maria Giovanna Marrosu

published 08 Apr 2013

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A Novel Alkaliphilic Bacillus Esterase Belongs to the 13^th Bacterial Lipolytic Enzyme Family

Lang Rao, Yanfen Xue, Yingying Zheng, Jian R. Lu, Yanhe Ma

published 05 Apr 2013

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Dissecting the Dynamics of HIV-1 Protein Sequence Diversity

Yongli Hu, Paul ThiamJoo Tan, Tin Wee Tan, J. Thomas August, Asif M. Khan

published 04 Apr 2013

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QC-Chain: Fast and Holistic Quality Control Method for Next-Generation Sequencing Data

Qian Zhou, Xiaoquan Su, Anhui Wang, Jian Xu, Kang Ning

published 02 Apr 2013

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How Effective Are DNA Barcodes in the Identification of African Rainforest Trees?

Ingrid Parmentier, Jérôme Duminil, Maria Kuzmina, Morgane Philippe, Duncan W. Thomas, David Kenfack, George B. Chuyong, Corinne Cruaud, Olivier J. Hardy

published 02 Apr 2013

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Coalescent-Based Genome Analyses Resolve the Early Branches of the Euarchontoglires

Vikas Kumar, Björn M. Hallström, Axel Janke

published 01 Apr 2013

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RNA-Seq Analysis of Cocos nucifera: Transcriptome Sequencing and De Novo Assembly for Subsequent Functional Genomics Approaches

Haikuo Fan, Yong Xiao, Yaodong Yang, Wei Xia, Annaliese S. Mason, Zhihui Xia, Fei Qiao, Songlin Zhao, Haoru Tang

published 29 Mar 2013

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CISA: Contig Integrator for Sequence Assembly of Bacterial Genomes

Shin-Hung Lin, Yu-Chieh Liao

published 28 Mar 2013

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