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Sequence alignment

An Integrated SNP Mining and Utilization (ISMU) Pipeline for Next Generation Sequencing Data

Sarwar Azam, Abhishek Rathore, [ ... ], Rajeev K. Varshney

Some Limitations of Public Sequence Data for Phylogenetic Inference (in Plants)

Cody E. Hinchliff, Stephen Andrew Smith

Assessment of the Impact of Using a Reference Transcriptome in Mapping Short RNA-Seq Reads

Shanrong Zhao

Novel Bioinformatics Method for Identification of Genome-Wide Non-Canonical Spliced Regions Using RNA-Seq Data

Yongsheng Bai, Justin Hassler, [ ... ], Maureen A. Sartor

Ancient Origins of RGK Protein Function: Modulation of Voltage-Gated Calcium Channels Preceded the Protostome and Deuterostome Split

Henry L. Puhl III, Van B. Lu, [ ... ], Stephen R. Ikeda

Comparative Mitogenomics of Plant Bugs (Hemiptera: Miridae): Identifying the AGG Codon Reassignments between Serine and Lysine

Ying Wang, Hu Li, [ ... ], Wanzhi Cai

Chimpanzee-Specific Endogenous Retrovirus Generates Genomic Variations in the Chimpanzee Genome

Seyoung Mun, Jungnam Lee, [ ... ], Kyudong Han

Prevalence and Genetic Diversity Analysis of Human Coronavirus OC43 among Adult Patients with Acute Respiratory Infections in Beijing, 2012

Qin Hu, Roujian Lu, [ ... ], Wenjie Tan

Secondary Structure Analyses of the Nuclear rRNA Internal Transcribed Spacers and Assessment of Its Phylogenetic Utility across the Brassicaceae (Mustards)

Patrick P. Edger, Michelle Tang, [ ... ], J. Chris Pires

Systematic Characterization and Comparative Analysis of the Rabbit Immunoglobulin Repertoire

Jason J. Lavinder, Kam Hon Hoi, [ ... ], George Georgiou

WImpiBLAST: Web Interface for mpiBLAST to Help Biologists Perform Large-Scale Annotation Using High Performance Computing

Parichit Sharma, Shrikant S. Mantri

A New Genotype Imputation Method with Tolerance to High Missing Rate and Rare Variants

Yumei Yang, Qishan Wang, [ ... ], Yuchun Pan

Direct Amplification, Sequencing and Profiling of Chlamydia trachomatis Strains in Single and Mixed Infection Clinical Samples

Sandeep J. Joseph, Ben Li, [ ... ], Timothy D. Read

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