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Sequence alignment

Analysis of Putative Apoplastic Effectors from the Nematode, Globodera rostochiensis, and Identification of an Expansin-Like Protein That Can Induce and Suppress Host Defenses

Shawkat Ali, Maxime Magne, Shiyan Chen, Olivier Côté, Barbara Gerič Stare, Natasa Obradovic, Lubna Jamshaid, Xiaohong Wang, Guy Bélair, Peter Moffett

published 21 Jan 2015

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A Toolkit for ARB to Integrate Custom Databases and Externally Built Phylogenies

Steven D. Essinger, Erin Reichenberger, Calvin Morrison, Christopher B. Blackwood, Gail L. Rosen

published 21 Jan 2015

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Development of Genetic Markers in Eucalyptus Species by Target Enrichment and Exome Sequencing

Modhumita Ghosh Dasgupta, Veeramuthu Dharanishanthi, Ishangi Agarwal, Konstantin V. Krutovsky

published 20 Jan 2015

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Evaluation of the DNA Barcodes in Dendrobium (Orchidaceae) from Mainland Asia

Songzhi Xu, Dezhu Li, Jianwu Li, Xiaoguo Xiang, Weitao Jin, Weichang Huang, Xiaohua Jin, Luqi Huang

published 20 Jan 2015

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Acquisition through Horizontal Gene Transfer of Plasmid pSMA198 by Streptococcus macedonicus ACA-DC 198 Points towards the Dairy Origin of the Species

Konstantinos Papadimitriou, Rania Anastasiou, Eleni Maistrou, Thomas Plakas, Nikos C. Papandreou, Stavros J. Hamodrakas, Stéphanie Ferreira, Philip Supply, Pierre Renault, Bruno Pot, Effie Tsakalidou

published 13 Jan 2015

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Functional Mapping of Protein-Protein Interactions in an Enzyme Complex by Directed Evolution

Kathrin Roderer, Martin Neuenschwander, Giosiana Codoni, Severin Sasso, Marianne Gamper, Peter Kast

published 31 Dec 2014

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Binpairs: Utilization of Illumina Paired-End Information for Improving Efficiency of Taxonomic Binning of Metagenomic Sequences

Anirban Dutta, Disha Tandon, Mohammed MH, Tungadri Bose, Sharmila S. Mande

published 31 Dec 2014

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Analysis of Potato virus Y Coat Protein Epitopes Recognized by Three Commercial Monoclonal Antibodies

Yan-Ping Tian, Jussi Hepojoki, Harri Ranki, Hilkka Lankinen, Jari P. T. Valkonen

published 26 Dec 2014

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Allele Workbench: Transcriptome Pipeline and Interactive Graphics for Allele-Specific Expression

Carol A. Soderlund, William M. Nelson, Stephen A. Goff

published 26 Dec 2014

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Div-BLAST: Diversification of Sequence Search Results

Elif Eser, Tolga Can, Hakan Ferhatosmanoğlu

published 22 Dec 2014

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Computational Analysis and Mapping of Novel Open Reading Frames in Influenza A Viruses

Yu-Nong Gong, Guang-Wu Chen, Chi-Jene Chen, Rei-Lin Kuo, Shin-Ru Shih

published 15 Dec 2014

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IM-TORNADO: A Tool for Comparison of 16S Reads from Paired-End Libraries

Patricio Jeraldo, Krishna Kalari, Xianfeng Chen, Jaysheel Bhavsar, Ashutosh Mangalam, Bryan White, Heidi Nelson, Jean-Pierre Kocher, Nicholas Chia

published 15 Dec 2014

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Detection of DNA Sequences Refractory to PCR Amplification Using a Biophysical SERRS Assay (Surface Enhanced Resonant Raman Spectroscopy)

Cécile Feuillie, Maxime M. Merheb, Benjamin Gillet, Gilles Montagnac, Isabelle Daniel, Catherine Hänni

published 12 Dec 2014

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