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RNA sequencing

An investigation of plasma cell-free RNA for the detection of colorectal cancer: From transcriptome marker selection to targeted validation

Emmalee J. Northrop-Albrecht, Chung Wah Wu, Calise K. Berger, William R. Taylor, Patrick H. Foote, Karen A. Doering, Anna M. Gonser, Aditya Bhagwate, Zhifu Sun, Douglas W. Mahoney, Kelli N. Burger, Lisa A. Boardman, John B. Kisiel

published 15 Aug 2024

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Hepatic transcript profiling in beef cattle: Effects of feeding endophyte-infected tall fescue seeds

Gastón F. Alfaro, Valentino Palombo, MariaSilvia D’Andrea, Wenqi Cao, Yue Zhang, Jonathan E. Beever, Russell B. Muntifering, Wilmer J. Pacheco, Soren P. Rodning, Xu Wang, Sonia J. Moisá

published 26 Jul 2024

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Prostaglandin D₂ receptor 2 downstream signaling and modulation of type 2 innate lymphoid cells from patients with asthma

Christina Gress, Maximilian Fuchs, Saskia Carstensen-Aurèche, Meike Müller, Jens M. Hohlfeld

published 25 Jul 2024

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Unraveling the molecular landscape of breast muscle development in domestic Yuzhong pigeons and European meat pigeon: Insights from Iso-seq and RNA-seq analysis

Pengkun Yang, Xinghui Song, Liheng Zhang, Xinlei Wang, Zhanbing Han, Runzhi Wang, Mingjun Yang, Peiyao Liu, Zhen Zhang

published 25 Jul 2024

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TabDEG: Classifying differentially expressed genes from RNA-seq data based on feature extraction and deep learning framework

Sifan Feng, Zhenyou Wang, Yinghua Jin, Shengbin Xu

published 22 Jul 2024

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Overexpression of miR-200s inhibits proliferation and invasion while increasing apoptosis in murine ovarian cancer cells

Resh Carter, Jim J. Petrik, Roger A. Moorehead

published 19 Jul 2024

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Differentially expressed heterogeneous overdispersion genes testing for count data

Yubai Yuan, Qi Xu, Agaz Wani, Jan Dahrendorff, Chengqi Wang, Arlina Shen, Janelle Donglasan, Sarah Burgan, Zachary Graham, Monica Uddin, Derek Wildman, Annie Qu

published 17 Jul 2024

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A cell competition system with one gene expression from a single-copy gene in one cell

Yoshinori Hasegawa, Megumi Nakano, Tsutomu Hosouchi, Takashi Watanabe, Izumi Yamaguchi, Manabu Nakayama, Osamu Ohara

published 05 Jul 2024

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The anti-tumor activity of tangeretin in esophageal squamous cell carcinoma by inhibiting GLI2-mediated transcription of GPNMB

Dong Yang, Quan Zhang, Haoyong Kuang, Jian Liu, Sen Wu, Li Wei, Wenjian Yao

published 26 Jun 2024

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Platelet-derived microvesicles isolated from type-2 diabetes mellitus patients harbour an altered miRNA signature and drive MDA-MB-231 triple-negative breast cancer cell invasion

Anca Tutuianu, Chinedu A. Anene, Mikayla Shelton, Valerie Speirs, Donald C. Whitelaw, Joanne Thorpe, Wayne Roberts, James R. Boyne

published 20 Jun 2024

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Unraveling the impact of AXIN1 mutations on HCC development: Insights from CRISPR/Cas9 repaired AXIN1-mutant liver cancer cell lines

Ruyi Zhang, Shanshan Li, Kelly Schippers, Boaz Eimers, Jiahui Niu, Bastian V. H. Hornung, Mirjam C. G. N. van den Hout, Wilfred F. J. van Ijcken, Maikel P. Peppelenbosch, Ron Smits

published 07 Jun 2024

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Effects of eicosapentaneoic acid on innate immune responses in an Atlantic salmon kidney cell line in vitro

Tor Gjøen, Bente Ruyter, Tone Kari Østbye

published 28 May 2024

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Genome-wide analysis of long noncoding RNAs as cis-acting regulators of transcription factor-encoding genes in IgA nephropathy

Yaling Zhai, Huijuan Tian, Wenhui Zhang, Shuaigang Sun, Zhanzheng Zhao

published 24 May 2024

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