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RNA sequencing

De novo transcriptome assembly and quantification reveal differentially expressed genes between soft-seed and hard-seed pomegranate (Punica granatum L.)

Hui Xue, Shangyin Cao, [ ... ], Diguang Zhao

Comparative transcriptomics of genetically divergent lines of chickens in response to Marek’s disease virus challenge at cytolytic phase

Kunzhe Dong, Shuang Chang, [ ... ], Huanmin Zhang

A prospective pilot study of genome-wide exome and transcriptome profiling in patients with small cell lung cancer progressing after first-line therapy

Glen J. Weiss, Sara A. Byron, [ ... ], Timothy G. Whitsett

Automated high throughput nucleic acid purification from formalin-fixed paraffin-embedded tissue samples for next generation sequence analysis

Simon Haile, Pawan Pandoh, [ ... ], Marco A. Marra

Alfalfa virus S, a new species in the family Alphaflexiviridae

Lev G. Nemchinov, Samuel C. Grinstead, Dimitre S. Mollov

ToNER: A tool for identifying nucleotide enrichment signals in feature-enriched RNA-seq data

Yuttachon Promworn, Pavita Kaewprommal, [ ... ], Jittima Piriyapongsa

A trichostatin A expression signature identified by TempO-Seq targeted whole transcriptome profiling

Joanne M. Yeakley, Peter J. Shepard, [ ... ], Bruce E. Seligmann

Pathogenic seedborne viruses are rare but Phaseolus vulgaris endornaviruses are common in bean varieties grown in Nicaragua and Tanzania

Noora Nordenstedt, Delfia Marcenaro, [ ... ], Jari P. T. Valkonen

Expression profile of Epstein-Barr virus and human adenovirus small RNAs in tonsillar B and T lymphocytes

Farzaneh Assadian, Wael Kamel, [ ... ], Göran Akusjärvi

Different microRNA profiles reveal the diverse outcomes induced by EV71 and CA16 infection in human umbilical vein endothelial cells using high-throughput sequencing

Jie Song, Yajie Hu, [ ... ], Longding Liu

RNA-Seq analysis of gene expression for floral development in crested wheatgrass (Agropyron cristatum L.)

Fangqin Zeng, Bill Biligetu, [ ... ], Yong-Bi Fu

Genomic and transcriptomic analyses reveal adaptation mechanisms of an Acidithiobacillus ferrivorans strain YL15 to alpine acid mine drainage

Tangjian Peng, Liyuan Ma, [ ... ], Weimin Zeng

Comparative transcriptome profiling of a thermal resistant vs. sensitive silkworm strain in response to high temperature under stressful humidity condition

Wenfu Xiao, Peng Chen, [ ... ], Cheng Lu

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