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RNA sequencing

Synovial Gene expression after Hemarthrosis differs between FVIII-deficient mice treated with recombinant FVIII or FVIII-Fc Fusion Protein

Bilgimol Chumappumkal Joseph, Thomas C. Whisenant, Esther J. Cooke, Jenny Y. Zhou, Nicca Falah, Juan Andres De-Pablo Moreno, Annette von Drygalski

published 19 May 2025

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RNA degradation patterns in cardiac tissues kept at different time intervals and temperatures before RNA sequencing

Stine Bøttcher Jacobsen, Jacob Tfelt-Hansen, Morten Holdgaard Smerup, Niels Morling, Jeppe Dyrberg Andersen

published 15 May 2025

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Microglia remodeling in the visual thalamus of the DBA/2J mouse model of glaucoma

Jennifer L. Thompson, Shaylah McCool, Jennie C. Smith, Victoria Schaal, Gurudutt Pendyala, Sowmya Yelamanchili, Matthew J. Van Hook

published 15 May 2025

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Integrating genomics and transcriptomics reveals candidate genes affecting loin muscle area in Huaxi cattle

Qingqing Xue, Lili Du, Tianyu Deng, Mang Liang, Keanning Li, Li Qian, Shiyuan Qiu, Yan Chen, Xue Gao, Lingyang Xu, Zezhao Wang, Caihong Zheng, Lupei Zhang, Junya Li, Huijiang Gao

published 09 May 2025

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TempO-seq and RNA-seq gene expression levels are highly correlated for most genes: A comparison using 39 human cell lines

Laura J. Word, Clinton M. Willis, Richard S. Judson, Logan J. Everett, Sarah E. Davidson-Fritz, Derik E. Haggard, Bryant A. Chambers, Jesse D. Rogers, Joseph L. Bundy, Imran Shah, Nisha S. Sipes, Joshua A. Harrill

published 09 May 2025

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Adipocyte-specific deletion of Dbc1 does not recapitulate healthy obesity phenotype but suggests regulation of inflammation signaling

Leonardo Santos, Rafael Sebastián Fort, Geraldine Schlapp, Karina Cal, Valentina Perez-Torrado, Maria Noel Meikle, Ana Paula Mulet, Camila Espasandín, Camila Chiesa, José R. Sotelo-Silveira, Jose M. Verdes, Paola Contreras, Aldo J. Calliari, Martina Crispo, Jose L. Badano, Carlos Escande

published 02 May 2025

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Reliable RNA-seq analysis from FFPE specimens as a means to accelerate cancer-related health disparities research

Mitchell J. Frederick, Dannelys Perez-Bello, Pedram Yadollahi, Patricia Castro, Alan Frederick, Andrew Frederick, Rashid A. Osman, Fonma Essien, Imelda Yebra, Ashley Hamlin, Thomas J. Ow, Heath D. Skinner, Vlad C. Sandulache

published 21 Apr 2025

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Trop-2 expression in non–small cell lung cancer

Peiwen Kuo, Emon Elboudwarej, Marianna Zavodovskaya, Kai-Wen Lin, Chingwei V. Lee, Lauri Diehl, Jilpa Patel, Sabeen Mekan, Juliane M. Jürgensmeier

published 15 Apr 2025

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Mapping the temporal transcriptomic signature of a viral pathogen through CAGE and nanopore sequencing

Dóra Tombácz, Balázs Kakuk, Gábor Torma, Ádám Fülöp, Ákos Dörmő, Gábor Gulyás, Zsolt Csabai, Zsolt Boldogkői

published 15 Apr 2025

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Deubiquitination of epidermal growth factor receptor by ubiquitin-specific peptidase 54 enhances drug sensitivity to gefitinib in gefitinib-resistant non-small cell lung cancer cells

Mi Seong Kim, Min Seuk Kim

published 01 Apr 2025

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mRNA extracted from frozen buffy coat samples stored long term in tubes with no RNA preservative shows promise for downstream sequencing analyses

Erik Bovinder Ylitalo, Linda Vidman, Sophia Harlid, Bethany Van Guelpen

published 19 Mar 2025

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Impact of spaceflight on gene expression in cultured human mesenchymal stem/stromal cells

Peng Huang, Bryan T. Piatkowski, Yesesri Cherukuri, Yan W. Asmann, Abba C. Zubair

published 13 Mar 2025

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Characterization of microRNA candidates at the primary site of infectious bronchitis virus infection: A comparative study of in vitro and in vivo avian models

Kelsey O’Dowd, Safieh Vatandour, Sadhiya S. Ahamed, Martine Boulianne, Charles M. Dozois, Carl A. Gagnon, Neda Barjesteh, Mohamed Faizal Abdul-Careem

published 11 Mar 2025

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