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RNA sequencing

Transcriptome sequencing reveals the evolutionary histories and gene expression evolution in two related Pagurus species

Zakea Sultana, Isaac Adeyemi Babarinde, Masafumi Nozawa, Kazuho Ikeo, Akira Asakura, Tomoyuki Nakano

published 20 Aug 2025

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Characterization of an unusual carlavirus-like RNA from papaya (Carica papaya) lacking essential genes

Milenka Vera, Raúl Cifuentes, Ronan Keener, Neil Olszewski, Robert A. Alvarez-Quinto, Diego F. Quito-Avila

published 08 Aug 2025

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Identification of podocyte molecular markers in diabetic kidney disease via single-cell RNA sequencing and machine learning

Hailin Li, Quhuan Li, Zuyan Fan, Yue Shen, Jiao Li, Fengxia Zhang

published 21 Jul 2025

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Genetic association of intelligence with longevity in Drosophila melanogaster

Mousumee Khan, Enkhchimeg Lkhagva, Hae-mi Kim, Chongkai Zhai, Sharif Hasan Siddiqui, Seong-Tshool Hong

published 02 Jul 2025

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Towards resilience: Transcriptional insights on flavonoid biosynthesis during peanut seed maturation phases

Gustavo Roberto Fonseca de Oliveira, Liam Walker, Rômulo Pedro Macêdo Lima, Thiago Barbosa Batista, Clíssia Barboza Mastrangelo, Edvaldo Aparecido Amaral da Silva

published 01 Jul 2025

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Pain, fatigue, and associated gene expressions over chemotherapy in patients with colorectal cancer

Weizi Wu, Aolan Li, Vijender Singh, Andrew Salner, Ming-Hui Chen, Michelle P. Judge, Xiaomei Cong, Wanli Xu

published 27 Jun 2025

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Genome-wide landscape of miRNA-mRNA-lncRNA-circRNA ceRNA network in Nanos2 deficient mice

Hongyi Li, Yuan Li, Yuting Wang, Lijian Liu, Ji Cui, Mao Zhang, Yiming Yan

published 27 Jun 2025

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Genomic profiling in hidradenitis suppurativa: InterOmics pipeline for DNA-RNA sequencing highlights HLA variants, keratin-associated mutations and extracellular matrix alterations as contributing factors to HS pathogenesis

Lucas André Cavalcanti Brandão, Ronald Rodrigues de Moura, Bruno Rodrigo Assunção, Cecilia Del Vecchio, Adamo Pio d’Adamo, Gudrun Ratzinger, Barbara Böckle, Nina Frischhut, Wolfram Jaschke, Matthias Schmuth, Muhammad Suleman, Angelo Valerio Marzano, Chiara Moltrasio, Paola Maura Tricarico, Sergio Crovella

published 20 Jun 2025

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Short tandem repeat variants are possibly associated with RNA secondary structure and gene expression

Nick Kinney, Dikshya Pathak, Emma Evans, Paola Arias

published 18 Jun 2025

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Hepatic transcriptome profiling unveils candidate genes in cattle with liver abscesses under the influence of beef genetics in dairy cattle

Luana D. Felizari, Sydney M. Bowman, Chiquito J. Crasto, Jhones O. Sarturi, Dale R. Woerner, Bradley J. Johnson

published 09 Jun 2025

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A PCR primer design method for identifying spider mite species using k-mer counting

Tomoko Matsuda, Hironori Sakamoto, Takumi Kayukawa, Yasuki Kitashima, Toshinori Kozaki, Tetsuo Gotoh

published 09 Jun 2025

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The hepatic transcriptome is differentially regulated by a standardized meal in healthy individuals compared to patients with fatty liver disease

Josephine Grandt, Christian D. Johansen, Anne-Sofie H. Jensen, Mikkel P. Werge, Elias B. Rashu, Andreas Møller, Anders E. Junker, Lise Hobolth, Christian Mortensen, Mogens Vyberg, Reza Rafiolsadat Serizawa, Søren Møller, Lise Lotte Gluud, Nicolai J. Wewer Albrechtsen

published 09 Jun 2025

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Evaluation of metatranscriptomic sequencing protocols to obtain full-length RNA virus genomes from mammalian tissues

Yiqiao Li, Mariana Polychronopoulou, Ine Boonen, Antonios Fikatas, Sophie Gryseels, Anne Laudisoit, Joelle Gouy de Bellocq, Bram Vrancken, Gkikas Magiorkinis, Philippe Lemey, Magda Bletsa

published 30 May 2025

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