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RNA sequencing

Evaluation of protocols for rRNA depletion-based RNA sequencing of nanogram inputs of mammalian total RNA

Simon Haile, Richard D. Corbett, [ ... ], Marco A. Marra

Transcriptional foliar profile of the C₃-CAM bromeliad Guzmania monostachia

Helenice Mercier, Maria Aurineide Rodrigues, [ ... ], Ana Zangirolame Gonçalves

Exploring the basis of 2-propenyl and 3-butenyl glucosinolate synthesis by QTL mapping and RNA-sequencing in Brassica juncea

Aimal Nawaz Khattak, Tianya Wang, [ ... ], Entang Tian

eQTL mapping of rare variant associations using RNA-seq data: An evaluation of approaches

Sharon Marie Lutz, Annie Thwing, Tasha Fingerlin

Ultra-deep sequencing reveals pre-mRNA splicing as a sequence driven high-fidelity process

Derrick J. Reynolds, Klemens J. Hertel

Transcriptome analysis of Xanthomonas oryzae pv. oryzicola exposed to H₂O₂ reveals horizontal gene transfer contributes to its oxidative stress response

Yuan Fang, Haoye Wang, [ ... ], Bo Zhu

A tailored approach to fusion transcript identification increases diagnosis of rare inherited disease

Gavin R. Oliver, Xiaojia Tang, [ ... ], Eric W. Klee

Transcriptome analysis of PK-15 cells in innate immune response to porcine deltacoronavirus infection

Shan Jiang, Fuqiang Li, [ ... ], Minghua Yan

LMX1A inhibits C-Myc expression through ANGPTL4 to exert tumor suppressive role in gastric cancer

Peiyu Qian, Jian Li, [ ... ], Li Feng

Variant analysis pipeline for accurate detection of genomic variants from transcriptome sequencing data

Modupeore O. Adetunji, Susan J. Lamont, Behnam Abasht, Carl J. Schmidt

Bulked segregant analysis RNA-seq (BSR-Seq) validated a stem resistance locus in Aegilops umbellulata, a wild relative of wheat

Erena A. Edae, Matthew N. Rouse

Identification of potassium phosphite responsive miRNAs and their targets in potato

María Florencia Rey-Burusco, Gustavo Raúl Daleo, Mariana Laura Feldman

Desmoplasia and oncogene driven acinar-to-ductal metaplasia are concurrent events during acinar cell-derived pancreatic cancer initiation in young adult mice

Benjamin L. Johnson, Marcela d’Alincourt Salazar, [ ... ], Don J. Diamond

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