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RNA sequencing

Benchmarking RNA-seq differential expression analysis methods using spike-in and simulation data

Bukyung Baik, Sora Yoon, Dougu Nam

Sequence count data are poorly fit by the negative binomial distribution

Stijn Hawinkel, J. C. W. Rayner, Luc Bijnens, Olivier Thas

Combining independent de novo assemblies to optimize leaf transcriptome of Persian walnut

Mohammad Sadat-Hosseini, Mohammad Reza Bakhtiarizadeh, [ ... ], Kourosh Vahdati

Retinal astrocytes transcriptome reveals Cyp1b1 regulates the expression of genes involved in cell adhesion and migration

Juliana Falero-Perez, Christine M. Sorenson, Nader Sheibani

The novel microRNAs hsa-miR-nov7 and hsa-miR-nov3 are over-expressed in locally advanced breast cancer

Deepak Poduval, Zuzana Sichmanova, [ ... ], Stian Knappskog

Comparability of the small RNA secretome across human biofluids concomitantly collected from healthy adults

Scott M. Langevin, Damaris Kuhnell, [ ... ], Susan Kasper

A Zipf-plot based normalization method for high-throughput RNA-seq data

Bin Wang

Comparative analysis of sugarcane root transcriptome in response to the plant growth-promoting Burkholderia anthina MYSP113

Mukesh Kumar Malviya, Chang-Ning Li, [ ... ], Yang-Rui Li

Robust induction of interferon and interferon-stimulated gene expression by influenza B/Yamagata lineage virus infection of A549 cells

Pengtao Jiao, Wenhui Fan, [ ... ], Jing Li

Bovistol B, bovistol D and strossmayerin: Sesquiterpene metabolites from the culture filtrate of the basidiomycete Coprinopsis strossmayeri

Alice M. Banks, Lijiang Song, [ ... ], Gary D. Foster

De novo transcriptome assembly of four organs of Collichthys lucidus and identification of genes involved in sex determination and reproduction

Wei Song, YiBing Zhang, XiaoJuan Zhang, JianFang Gui

Glomerular endothelial derived vesicles mediate podocyte dysfunction: A potential role for miRNA

N. Hill, D. L. Michell, [ ... ], K. J. Woollard

The RNA-seq transcriptomic analysis reveals genes mediating salt tolerance through rapid triggering of ion transporters in a mutant barley

Sareh Yousefirad, Hassan Soltanloo, [ ... ], Vahid Shariati

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