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RNA sequencing

Vitamin D-mediated effects on airway innate immunity in vitro

Emma M. Stapleton, Kathy Keck, Robert Windisch, Mallory R. Stroik, Andrew L. Thurman, Joseph Zabner, Ian M. Thornell, Alejandro A. Pezzulo, Julia Klesney-Tait, Alejandro P. Comellas

published 06 Jun 2022

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Characterization of the genome and silk-gland transcriptomes of Darwin’s bark spider (Caerostris darwini)

Paul L. Babb, Matjaž Gregorič, Nicholas F. Lahens, David N. Nicholson, Cheryl Y. Hayashi, Linden Higgins, Matjaž Kuntner, Ingi Agnarsson, Benjamin F. Voight

published 06 Jun 2022

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A preliminary, observational study using whole-blood RNA sequencing reveals differential expression of inflammatory and bone markers post-implantation of percutaneous osseointegrated prostheses

Andrew Miller, Sujee Jeyapalina, Jay Agarwal, Mitchell Mansel, James Peter Beck

published 26 May 2022

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Use of CRISPR/Cas9 with homology-directed repair to silence the human topoisomerase IIα intron-19 5’ splice site: Generation of etoposide resistance in human leukemia K562 cells

Victor A. Hernandez, Jessika Carvajal-Moreno, Xinyi Wang, Maciej Pietrzak, Jack C. Yalowich, Terry S. Elton

published 26 May 2022

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Circulating extracellular vesicles exhibit a differential miRNA profile in gestational diabetes mellitus pregnancies

Shanthie Thamotharan, Shubhamoy Ghosh, Laura James-Allan, Margarida Y. Y. Lei, Carla Janzen, Sherin U. Devaskar

published 25 May 2022

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Differential gene expression profile of multinodular goiter

Wenberger Lanza Daniel de Figueiredo, Eraldo Ferreira Lopes, Deborah Laredo Jezini, Lorena Naciff Marçal, Enedina Nogueira de Assunção, Paulo Rodrigo Ribeiro Rodrigues, Adolfo José da Mota, Diego Monteiro de Carvalho, Spartaco Astolfi Filho, João Bosco Lopes Botelho

published 20 May 2022

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A model for isoform-level differential expression analysis using RNA-seq data without pre-specifying isoform structure

Yang Liu, Junying Wang, Song Wu, Jie Yang

published 16 May 2022

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Transcriptomes of testis and pituitary from male Nile tilapia (O. niloticus L.) in the context of social status

Michelle Thönnes, Rebecca Prause, Berta Levavi-Sivan, Frank Pfennig

published 11 May 2022

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Metabolic and transcriptome analysis of dark red taproot in radish (Raphanus sativus L.)

Shuangping Heng, Changbin Gao, Mengdi Cui, Jing Fu, Sujing Ren, Kaiyun Xin, Congan He, Aihua Wang, Liping Song, Liguang Tang, Bincai Wang, Xueli Zhang

published 10 May 2022

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Assessment of RNA extraction protocols from cladocerans

Muhammad Raznisyafiq Razak, Ahmad Zaharin Aris, Fatimah Md Yusoff, Zetty Norhana Balia Yusof, Sang Don Kim, Kyoung Woong Kim

published 26 Apr 2022

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Effects of autophagy modulators tamoxifen and chloroquine on the expression profiles of long non-coding RNAs in MIAMI cells exposed to IFNγ

Rajkaran Banga, Veerkaran Banga, Amr Eltalla, Lauren Shahin, Sonam Parag, Maha Naim, Easha Iyer, Neha Kumrah, Brian Zacharias, Lubov Nathanson, Vladimir Beljanski

published 21 Apr 2022

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Genomic heterogeneity underlies multidrug resistance in Pseudomonas aeruginosa: A population-level analysis beyond susceptibility testing

Laura J. Rojas, Mohamad Yasmin, Jacquelynn Benjamino, Steven M. Marshall, Kailynn J. DeRonde, Nikhil P. Krishnan, Federico Perez, Andrew A. Colin, Monica Cardenas, Octavio Martinez, Armando Pérez-Cardona, Daniel D. Rhoads, Michael R. Jacobs, John J. LiPuma, Michael W. Konstan, Alejandro J. Vila, Andrea Smania, Andrew R. Mack, Jacob G. Scott, Mark D. Adams, Lilian M. Abbo, Robert A. Bonomo

published 31 Mar 2022

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The endometrial transcriptomic response to pregnancy is altered in cows after uterine infection

Mackenzie J. Dickson, Jeanette V. Bishop, Thomas R. Hansen, I. Martin Sheldon, John J. Bromfield

published 31 Mar 2022

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