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RNA sequencing

Evaluating Methods for Isolating Total RNA and Predicting the Success of Sequencing Phylogenetically Diverse Plant Transcriptomes

Marc T. J. Johnson, Eric J. Carpenter, [ ... ], Gane Ka-Shu Wong

High-Throughput Sequencing of Arabidopsis microRNAs: Evidence for Frequent Birth and Death of MIRNA Genes

Noah Fahlgren, Miya D. Howell, [ ... ], James C. Carrington

Optimization of differentiation and transcriptomic profile of THP-1 cells into macrophage by PMA

Tiezhu Liu, Tao Huang, [ ... ], Mifang Liang

Brain Microbial Populations in HIV/AIDS: α-Proteobacteria Predominate Independent of Host Immune Status

William G. Branton, Kristofor K. Ellestad, [ ... ], Christopher Power

RNA-Seq Transcriptome Profiling Identifies CRISPLD2 as a Glucocorticoid Responsive Gene that Modulates Cytokine Function in Airway Smooth Muscle Cells

Blanca E. Himes, Xiaofeng Jiang, [ ... ], Quan Lu

Development of Strategies for SNP Detection in RNA-Seq Data: Application to Lymphoblastoid Cell Lines and Evaluation Using 1000 Genomes Data

Emma M. Quinn, Paul Cormican, [ ... ], Derek W. Morris

Pepper Mild Mottle Virus, a Plant Virus Associated with Specific Immune Responses, Fever, Abdominal Pains, and Pruritus in Humans

Philippe Colson, Hervé Richet, [ ... ], Didier Raoult

A Versatile Method to Design Stem-Loop Primer-Based Quantitative PCR Assays for Detecting Small Regulatory RNA Molecules

Zsolt Czimmerer, Julianna Hulvely, [ ... ], Balint L. Balint

Tumor Transcriptome Sequencing Reveals Allelic Expression Imbalances Associated with Copy Number Alterations

Brian B. Tuch, Rebecca R. Laborde, [ ... ], David I. Smith

RNA Sequencing of the Human Milk Fat Layer Transcriptome Reveals Distinct Gene Expression Profiles at Three Stages of Lactation

Danielle G. Lemay, Olivia A. Ballard, [ ... ], Laurie A. Nommsen-Rivers

Turbo FISH: A Method for Rapid Single Molecule RNA FISH

Sydney M. Shaffer, Min-Tzu Wu, Marshall J. Levesque, Arjun Raj

Comparison of normalization approaches for gene expression studies completed with high-throughput sequencing

Farnoosh Abbas-Aghababazadeh, Qian Li, Brooke L. Fridley

Ago2 Immunoprecipitation Identifies Predicted MicroRNAs in Human Embryonic Stem Cells and Neural Precursors

Loyal A. Goff, Jonathan Davila, [ ... ], Ronald P. Hart

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