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RNA sequencing

Characterization of a Heme-Regulated Non-Coding RNA Encoded by the prrF Locus of Pseudomonas aeruginosa

Amanda G. Oglesby-Sherrouse, Michael L. Vasil

published 08 Apr 2010

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Pepper Mild Mottle Virus, a Plant Virus Associated with Specific Immune Responses, Fever, Abdominal Pains, and Pruritus in Humans

Philippe Colson, Hervé Richet, Christelle Desnues, Fanny Balique, Valérie Moal, Jean-Jacques Grob, Philippe Berbis, Hervé Lecoq, Jean-Robert Harlé, Yvon Berland, Didier Raoult

published 06 Apr 2010

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Discovery of Novel MicroRNAs in Female Reproductive Tract Using Next Generation Sequencing

Chad J. Creighton, Ashley L. Benham, Huifeng Zhu, Mahjabeen F. Khan, Jeffrey G. Reid, Ankur K. Nagaraja, Michael D. Fountain Jr, Olivia Dziadek, Derek Han, Lang Ma, Jong Kim, Shannon M. Hawkins, Matthew L. Anderson, Martin M. Matzuk, Preethi H. Gunaratne

published 10 Mar 2010

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Tumor Transcriptome Sequencing Reveals Allelic Expression Imbalances Associated with Copy Number Alterations

Brian B. Tuch, Rebecca R. Laborde, Xing Xu, Jian Gu, Christina B. Chung, Cinna K. Monighetti, Sarah J. Stanley, Kerry D. Olsen, Jan L. Kasperbauer, Eric J. Moore, Adam J. Broomer, Ruoying Tan, Pius M. Brzoska, Matthew W. Muller, Asim S. Siddiqui, Yan W. Asmann, Yongming Sun, Scott Kuersten, Melissa A. Barker, Francisco M. De La Vega, David I. Smith

published 19 Feb 2010

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Monitoring Genomic Sequences during SELEX Using High-Throughput Sequencing: Neutral SELEX

Bob Zimmermann, Tanja Gesell, Doris Chen, Christina Lorenz, Renée Schroeder

published 11 Feb 2010

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3′-End Sequencing for Expression Quantification (3SEQ) from Archival Tumor Samples

Andrew H. Beck, Ziming Weng, Daniela M. Witten, Shirley Zhu, Joseph W. Foley, Phil Lacroute, Cheryl L. Smith, Robert Tibshirani, Matt van de Rijn, Arend Sidow, Robert B. West

published 19 Jan 2010

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A Statistical Method for the Detection of Alternative Splicing Using RNA-Seq

Liguo Wang, Yuanxin Xi, Jun Yu, Liping Dong, Laising Yen, Wei Li

published 08 Jan 2010

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Explaining the Imperfection of the Molecular Clock of Hominid Mitochondria

Eva-Liis Loogväli, Toomas Kivisild, Tõnu Margus, Richard Villems

published 29 Dec 2009

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Genome-Wide Identification of Schistosoma japonicum MicroRNAs Using a Deep-Sequencing Approach

Jian Huang, Pei Hao, Hui Chen, Wei Hu, Qing Yan, Feng Liu, Ze-Guang Han

published 08 Dec 2009

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Deep Sequencing of Viroid-Derived Small RNAs from Grapevine Provides New Insights on the Role of RNA Silencing in Plant-Viroid Interaction

Beatriz Navarro, Vitantonio Pantaleo, Andreas Gisel, Simon Moxon, Tamas Dalmay, György Bisztray, Francesco Di Serio, József Burgyán

published 05 Nov 2009

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Identification of miRNAs in a Liver of a Human Fetus by a Modified Method

Dong Liu, Jing Fan, Manxue Mei, Sigurdur Ingvarsson, Huiping Chen

published 26 Oct 2009

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Deep Sequencing of the Small RNAs Derived from Two Symptomatic Variants of a Chloroplastic Viroid: Implications for Their Genesis and for Pathogenesis

Francesco Di Serio, Andreas Gisel, Beatriz Navarro, Sonia Delgado, Ángel-Emilio Martínez de Alba, Giacinto Donvito, Ricardo Flores

published 21 Oct 2009

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Ago2 Immunoprecipitation Identifies Predicted MicroRNAs in Human Embryonic Stem Cells and Neural Precursors

Loyal A. Goff, Jonathan Davila, Mavis R. Swerdel, Jennifer C. Moore, Rick I. Cohen, Hao Wu, Yi E. Sun, Ronald P. Hart

published 28 Sep 2009

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