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RNA sequencing

Cartography of Methicillin-Resistant S. aureus Transcripts: Detection, Orientation and Temporal Expression during Growth Phase and Stress Conditions

Marie Beaume, David Hernandez, Laurent Farinelli, Cécile Deluen, Patrick Linder, Christine Gaspin, Pascale Romby, Jacques Schrenzel, Patrice Francois

published 20 May 2010

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Identification of miRNA from Porphyra yezoensis by High-Throughput Sequencing and Bioinformatics Analysis

Chengwei Liang, Xiaowen Zhang, Jian Zou, Dong Xu, Feng Su, Naihao Ye

published 19 May 2010

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Deep Sequencing of Human Nuclear and Cytoplasmic Small RNAs Reveals an Unexpectedly Complex Subcellular Distribution of miRNAs and tRNA 3′ Trailers

Jian-You Liao, Li-Ming Ma, Yan-Hua Guo, Yu-Chan Zhang, Hui Zhou, Peng Shao, Yue-Qin Chen, Liang-Hu Qu

published 14 May 2010

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Characterization of Quasispecies of Pandemic 2009 Influenza A Virus (A/H1N1/2009) by De Novo Sequencing Using a Next-Generation DNA Sequencer

Makoto Kuroda, Harutaka Katano, Noriko Nakajima, Minoru Tobiume, Akira Ainai, Tsuyoshi Sekizuka, Hideki Hasegawa, Masato Tashiro, Yuko Sasaki, Yoshichika Arakawa, Satoru Hata, Masahide Watanabe, Tetsutaro Sata

published 23 Apr 2010

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Characterization of a Heme-Regulated Non-Coding RNA Encoded by the prrF Locus of Pseudomonas aeruginosa

Amanda G. Oglesby-Sherrouse, Michael L. Vasil

published 08 Apr 2010

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Pepper Mild Mottle Virus, a Plant Virus Associated with Specific Immune Responses, Fever, Abdominal Pains, and Pruritus in Humans

Philippe Colson, Hervé Richet, Christelle Desnues, Fanny Balique, Valérie Moal, Jean-Jacques Grob, Philippe Berbis, Hervé Lecoq, Jean-Robert Harlé, Yvon Berland, Didier Raoult

published 06 Apr 2010

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Discovery of Novel MicroRNAs in Female Reproductive Tract Using Next Generation Sequencing

Chad J. Creighton, Ashley L. Benham, Huifeng Zhu, Mahjabeen F. Khan, Jeffrey G. Reid, Ankur K. Nagaraja, Michael D. Fountain Jr, Olivia Dziadek, Derek Han, Lang Ma, Jong Kim, Shannon M. Hawkins, Matthew L. Anderson, Martin M. Matzuk, Preethi H. Gunaratne

published 10 Mar 2010

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Tumor Transcriptome Sequencing Reveals Allelic Expression Imbalances Associated with Copy Number Alterations

Brian B. Tuch, Rebecca R. Laborde, Xing Xu, Jian Gu, Christina B. Chung, Cinna K. Monighetti, Sarah J. Stanley, Kerry D. Olsen, Jan L. Kasperbauer, Eric J. Moore, Adam J. Broomer, Ruoying Tan, Pius M. Brzoska, Matthew W. Muller, Asim S. Siddiqui, Yan W. Asmann, Yongming Sun, Scott Kuersten, Melissa A. Barker, Francisco M. De La Vega, David I. Smith

published 19 Feb 2010

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Monitoring Genomic Sequences during SELEX Using High-Throughput Sequencing: Neutral SELEX

Bob Zimmermann, Tanja Gesell, Doris Chen, Christina Lorenz, Renée Schroeder

published 11 Feb 2010

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3′-End Sequencing for Expression Quantification (3SEQ) from Archival Tumor Samples

Andrew H. Beck, Ziming Weng, Daniela M. Witten, Shirley Zhu, Joseph W. Foley, Phil Lacroute, Cheryl L. Smith, Robert Tibshirani, Matt van de Rijn, Arend Sidow, Robert B. West

published 19 Jan 2010

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A Statistical Method for the Detection of Alternative Splicing Using RNA-Seq

Liguo Wang, Yuanxin Xi, Jun Yu, Liping Dong, Laising Yen, Wei Li

published 08 Jan 2010

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Explaining the Imperfection of the Molecular Clock of Hominid Mitochondria

Eva-Liis Loogväli, Toomas Kivisild, Tõnu Margus, Richard Villems

published 29 Dec 2009

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Genome-Wide Identification of Schistosoma japonicum MicroRNAs Using a Deep-Sequencing Approach

Jian Huang, Pei Hao, Hui Chen, Wei Hu, Qing Yan, Feng Liu, Ze-Guang Han

published 08 Dec 2009

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