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RNA sequencing

Transcriptome Analysis of Female and Male Xiphophorus maculatus Jp 163 A

Ziping Zhang, Yilei Wang, Shuhong Wang, Jingtao Liu, Wesley Warren, Makedonka Mitreva, Ronald B. Walter

published 05 Apr 2011

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MicroRNA Expression Signatures of Bladder Cancer Revealed by Deep Sequencing

Yonghua Han, Jiahao Chen, Xiaokun Zhao, Chaozhao Liang, Yong Wang, Liang Sun, Zhimao Jiang, Zhongfu Zhang, Ruilin Yang, Jing Chen, Zesong Li, Aifa Tang, Xianxin Li, Jiongxian Ye, Zhichen Guan, Yaoting Gui, Zhiming Cai

published 28 Mar 2011

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Evaluating Gene Expression in C57BL/6J and DBA/2J Mouse Striatum Using RNA-Seq and Microarrays

Daniel Bottomly, Nicole A. R. Walter, Jessica Ezzell Hunter, Priscila Darakjian, Sunita Kawane, Kari J. Buck, Robert P. Searles, Michael Mooney, Shannon K. McWeeney, Robert Hitzemann

published 24 Mar 2011

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Effects of Nickel Treatment on H3K4 Trimethylation and Gene Expression

Kam-Meng Tchou-Wong, Kathrin Kiok, Zuojian Tang, Thomas Kluz, Adriana Arita, Phillip R. Smith, Stuart Brown, Max Costa

published 24 Mar 2011

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Decoding a Substantial Set of Samples in Parallel by Massive Sequencing

Mårten Neiman, Sverker Lundin, Peter Savolainen, Afshin Ahmadian

published 09 Mar 2011

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A Comparison of Single Molecule and Amplification Based Sequencing of Cancer Transcriptomes

Lee T. Sam, Doron Lipson, Tal Raz, Xuhong Cao, John Thompson, Patrice M. Milos, Dan Robinson, Arul M. Chinnaiyan, Chandan Kumar-Sinha, Christopher A. Maher

published 01 Mar 2011

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Drosophila S2 Cells Are Non-Permissive for Vaccinia Virus DNA Replication Following Entry via Low pH-Dependent Endocytosis and Early Transcription

Zain Bengali, P. S. Satheshkumar, Zhilong Yang, Andrea S. Weisberg, Nir Paran, Bernard Moss

published 15 Feb 2011

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Discovery of Novel Human Breast Cancer MicroRNAs from Deep Sequencing Data by Analysis of Pri-MicroRNA Secondary Structures

Seongho Ryu, Natasha Joshi, Kevin McDonnell, Jongchan Woo, Hyejin Choi, Dingcheng Gao, William R. McCombie, Vivek Mittal

published 08 Feb 2011

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Detection and Removal of Biases in the Analysis of Next-Generation Sequencing Reads

Schraga Schwartz, Ram Oren, Gil Ast

published 31 Jan 2011

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Rescue of Foot-and-Mouth Disease Viruses That Are Pathogenic for Cattle from Preserved Viral RNA Samples

Graham J. Belsham, Syed M. Jamal, Kirsten Tjørnehøj, Anette Bøtner

published 28 Jan 2011

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Discovery of Porcine microRNAs in Multiple Tissues by a Solexa Deep Sequencing Approach

Sheng-Song Xie, Xin-Yun Li, Teng Liu, Jian-Hua Cao, Qiang Zhong, Shu-Hong Zhao

published 25 Jan 2011

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Sequencing and Bioinformatics-Based Analyses of the microRNA Transcriptome in Hepatitis B–Related Hepatocellular Carcinoma

Yoshiaki Mizuguchi, Takuya Mishima, Shigeki Yokomuro, Yasuo Arima, Yutaka Kawahigashi, Kengo Shigehara, Tomohiro Kanda, Hiroshi Yoshida, Eiji Uchida, Takashi Tajiri, Toshihiro Takizawa

published 25 Jan 2011

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MicroRNAs MiR-17, MiR-20a, and MiR-106b Act in Concert to Modulate E2F Activity on Cell Cycle Arrest during Neuronal Lineage Differentiation of USSC

Hans-Ingo Trompeter, Hassane Abbad, Katharina M. Iwaniuk, Markus Hafner, Neil Renwick, Thomas Tuschl, Jessica Schira, Hans Werner Müller, Peter Wernet

published 20 Jan 2011

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