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RNA sequencing

Selective Depletion of rRNA Enables Whole Transcriptome Profiling of Archival Fixed Tissue

John D. Morlan, Kunbin Qu, Dominick V. Sinicropi

published 10 Aug 2012

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Mating of the Stichotrichous Ciliate Oxytricha trifallax Induces Production of a Class of 27 nt Small RNAs Derived from the Parental Macronucleus

Alan M. Zahler, Zachary T. Neeb, Athena Lin, Sol Katzman

published 10 Aug 2012

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MicroRNA Profiling of Epstein-Barr Virus-Associated NK/T-Cell Lymphomas by Deep Sequencing

Natalie Motsch, Julia Alles, Jochen Imig, Jiayun Zhu, Stephanie Barth, Tanja Reineke, Marianne Tinguely, Sergio Cogliatti, Anne Dueck, Gunter Meister, Christoph Renner, Friedrich A. Grässer

published 03 Aug 2012

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De Novo Sequencing and Transcriptome Analysis of the Central Nervous System of Mollusc Lymnaea stagnalis by Deep RNA Sequencing

Hisayo Sadamoto, Hironobu Takahashi, Taketo Okada, Hiromichi Kenmoku, Masao Toyota, Yoshinori Asakawa

published 01 Aug 2012

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Deep Sequencing-Based Transcriptome Analysis of Chicken Spleen in Response to Avian Pathogenic Escherichia coli (APEC) Infection

Qinghua Nie, Erin E. Sandford, Xiquan Zhang, Lisa K. Nolan, Susan J. Lamont

published 31 Jul 2012

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Synthetic Spike-in Standards Improve Run-Specific Systematic Error Analysis for DNA and RNA Sequencing

Justin M. Zook, Daniel Samarov, Jennifer McDaniel, Shurjo K. Sen, Marc Salit

published 31 Jul 2012

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DNase SISPA-Next Generation Sequencing Confirms Schmallenberg Virus in Belgian Field Samples and Identifies Genetic Variation in Europe

Toon Rosseel, Matthias Scheuch, Dirk Höper, Nick De Regge, Ann Brigitte Caij, Frank Vandenbussche, Steven Van Borm

published 27 Jul 2012

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Evaluation of Persistence of Resistant Variants with Ultra-Deep Pyrosequencing in Chronic Hepatitis C Patients Treated with Telaprevir

Xiomara V. Thomas, Joep de Bruijne, James C. Sullivan, Tara L. Kieffer, Cynthia K. Y. Ho, Sjoerd P. Rebers, Michel de Vries, Hendrik W. Reesink, Christine J. Weegink, Richard Molenkamp, Janke Schinkel

published 27 Jul 2012

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Identification of miRNA Signatures during the Differentiation of hESCs into Retinal Pigment Epithelial Cells

Ganlu Hu, Kevin Huang, Juehua Yu, Sailesh Gopalakrishna-Pillai, Jun Kong, He Xu, Zhenshan Liu, Kunshan Zhang, Jun Xu, Yuping Luo, Siguang Li, Yi E. Sun, Linda E. Iverson, Zhigang Xue, Guoping Fan

published 27 Jul 2012

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Differential Gene Expression in Tamoxifen-Resistant Breast Cancer Cells Revealed by a New Analytical Model of RNA-Seq Data

Kathryn J. Huber-Keener, Xiuping Liu, Zhong Wang, Yaqun Wang, Willard Freeman, Song Wu, Maricarmen D. Planas-Silva, Xingcong Ren, Yan Cheng, Yi Zhang, Kent Vrana, Chang-Gong Liu, Jin-Ming Yang, Rongling Wu

published 23 Jul 2012

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Novel MicroRNAs Differentially Expressed during Aging in the Mouse Brain

Sachi Inukai, Alexandre de Lencastre, Michael Turner, Frank Slack

published 23 Jul 2012

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Global Analysis of the Small RNA Transcriptome in Different Ploidies and Genomic Combinations of a Vertebrate Complex – The Squalius alburnoides

Angela Inácio, Joana Pinho, Patrícia Matos Pereira, Luca Comai, Maria Manuela Coelho

published 18 Jul 2012

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Sorting the Wheat from the Chaff: Identifying miRNAs in Genomic Survey Sequences of Triticum aestivum Chromosome 1AL

Stuart J. Lucas, Hikmet Budak

published 17 Jul 2012

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