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RNA sequencing

scLTF: A self-training clustering framework for large-scale single-cell RNA-Seq data

Hongyi Yuan, Chunyan Wang, Qiucheng Sun, Mingyu Sun, Mujie Fan

published 24 Sep 2026

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Azithromycin and its non-antibacterial derivative EP317 attenuate select aspects of ventilator-induced lung injury in rats

Sigurbergur Karason, Arni Asbjarnarson, Saevar Ingthorsson, Kolbrun Bjork Jonasdottir, Jennifer Kricker, Thorarinn Gudjonsson, Jon Petur Joelsson

published 24 Sep 2026

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Single-cell RNA-seq and machine learning identify HMGN2 as a lactylation-associated hub gene in heart failure

Anzhen Xu, Yanbo Li, Qing Gong, Hanrui Sun, Jiayu Shi, Jingyu Li, Pengyang Gu, Jixu Shi, Xiang Li, Qi Lu

published 21 Sep 2026

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Metagenomic sequencing in encephalitis diagnostics: Challenges and opportunities in clinical settings

Erika Stentoft, Josefin Olausson, Emilio Rudbeck, Marie Studahl, Hedvig E. Jakobsson

published 15 Sep 2026

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A novel one-step multiplex PCR method (OS-MPCR) for efficient NGS library preparation in cancer

Haiyan Feng, Xiao Hu, Lei Zhang, Qi Zhang, Shuocun Wang, Bingqing Lv, Yufeng Zhang, Dong Shi, Ping Zhou

published 15 Sep 2026

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Revisiting differential expression analysis: An updated six-dimensional comparative study

Jianxiong Wu, Shaoke Lu, Hui Yao, Zhaoyuan Fang

published 26 Aug 2026

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Transcriptome analysis of hepatopancreas of Litopenaeus vannamei after acute exposure to Alexandrium pacificum

Fuyuan Zeng, Haiming Chen, Huijie Yang, Tong Li, Hui Huang, Shafira Citra Desrika Putri, Zhangxi Hu, Yulei Zhang

published 25 Aug 2026

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First complete genome sequences and transcript expression profiling of tea plant necrotic ring blotch virus isolates from Iran

Fereshteh Esmaeilzadeh, Davoud Koolivand, Abozar Ghorbani

published 25 Aug 2026

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Bidirectional phenotypic transition in macrophages influences triple-negative breast cancer cell immune evasive patterns and response to chemotherapies in a co-culture spheroid model

Chen Cheng, Brett A. McGregor, Junguk Hur, Colin K. Combs

published 14 Aug 2026

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Good DNA- and sufficient RNA integrity in formalin-free paraffin-embedded tissues

Maarten Niemantsverdriet, Natalie Methorst, Sanne Yvet Hoek, Ageeth Knol, Agnes Marije Hoogland

published 14 Aug 2026

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L-Phenylalanine restriction enhances L-boronophenylalanine uptake and improves boron neutron capture therapy efficacy in tumor cell lines

Yuki Tamari, Rie Saba, Takushi Takata, Hiroyuki Kimura, Mao Takita, Kenta Yashiro, Minoru Suzuki, Hideya Yamazaki, Kei Yamada

published 13 Aug 2026

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Spatially localized immune metaprograms reveal micro-niche organization in the human Dorsal Root Ganglion

Kyuhyung Choi, Kaehong Lee, Baeki E. Kang, Tae-Min Kim

published 03 Aug 2026

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Tool choice matters: Evaluating edgeR vs. DESeq2 for sensitivity, robustness, and cross-study performance

Mostafa Rezapour

published 13 Jul 2026

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