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Reactants

Accelerating the Gillespie τ-Leaping Method Using Graphics Processing Units

Ivan Komarov, Roshan M. D’Souza, Jose-Juan Tapia

published 08 Jun 2012

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QM/MM MD and Free Energy Simulations of G9a-Like Protein (GLP) and Its Mutants: Understanding the Factors that Determine the Product Specificity

Yuzhuo Chu, Jianzhuang Yao, Hong Guo

published 18 May 2012

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A Rapid, Cost-Effective Method of Assembly and Purification of Synthetic DNA Probes >100 bp

Michael A. Jensen, Lauren Jauregui, Ronald W. Davis

published 06 Apr 2012

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Confining Domains Lead to Reaction Bursts: Reaction Kinetics in the Plasma Membrane

Ziya Kalay, Takahiro K. Fujiwara, Akihiro Kusumi

published 27 Mar 2012

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Three-Dimensional Stochastic Off-Lattice Model of Binding Chemistry in Crowded Environments

Byoungkoo Lee, Philip R. LeDuc, Russell Schwartz

published 17 Jan 2012

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Biapenem Inactivation by B2 Metallo β-Lactamases: Energy Landscape of the Post-Hydrolysis Reactions

Domenico L. Gatti

published 12 Jan 2012

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Balanced Biochemical Reactions: A New Approach to Unify Chemical and Biochemical Thermodynamics

Antonio Sabatini, Alberto Vacca, Stefano Iotti

published 11 Jan 2012

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The Origin of Large Molecules in Primordial Autocatalytic Reaction Networks

Varun Giri, Sanjay Jain

published 04 Jan 2012

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A Graphical User Interface for a Method to Infer Kinetics and Network Architecture (MIKANA)

Márcio A. Mourão, Jeyaraman Srividhya, Patrick E. McSharry, Edmund J. Crampin, Santiago Schnell

published 11 Nov 2011

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Modeling of Mitochondria Bioenergetics Using a Composable Chemiosmotic Energy Transduction Rate Law: Theory and Experimental Validation

Ivan Chang, Margit Heiske, Thierry Letellier, Douglas Wallace, Pierre Baldi

published 08 Sep 2011

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ENZO: A Web Tool for Derivation and Evaluation of Kinetic Models of Enzyme Catalyzed Reactions

Staš Bevc, Janez Konc, Jure Stojan, Milan Hodošček, Matej Penca, Matej Praprotnik, Dušanka Janežič

published 19 Jul 2011

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Rate-Independent Constructs for Chemical Computation

Phillip Senum, Marc Riedel

published 30 Jun 2011

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Protein-Protein Fusion Catalyzed by Sortase A

David A. Levary, Ranganath Parthasarathy, Eric T. Boder, Margaret E. Ackerman

published 06 Apr 2011

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