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Proteomes

Exploring multisite heterogeneity of human basal cell carcinoma proteome and transcriptome

Ariel Berl, Ofir Shir-az, Ilai Genish, Hadas Biran, Din Mann, Amrita Singh, Julia Wise, Vladimir Kravtsov, Debora Kidron, Alexander Golberg, Edward Vitkin, Zohar Yakhini, Avshalom Shalom

published 10 Nov 2023

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Sertoli cell-enriched proteins in mouse and human testicular interstitial fluid

Liza O’Donnell, Laura F. Dagley, Michael Curley, Annalucia Darbey, Peter J. O’Shaughnessy, Thorsten Diemer, Adrian Pilatz, Daniela Fietz, Peter G. Stanton, Lee B. Smith, Diane Rebourcet

published 01 Sep 2023

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Protein embeddings improve phage-host interaction prediction

Mark Edward M. Gonzales, Jennifer C. Ureta, Anish M. S. Shrestha

published 24 Jul 2023

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Exposure to long wavelength light that improves aged mitochondrial function shifts acute cytokine expression in serum and the retina

Harpreet Shinhmar, Chris Hogg, Glen Jeffery

published 21 Jul 2023

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Plasma proteome perturbation for CMV DNAemia in kidney transplantation

Tara K. Sigdel, Patrick Boada, Maggie Kerwin, Priyanka Rashmi, David Gjertson, Maura Rossetti, Swastika Sur, Dane Munar, James Cimino, Richard Ahn, Harry Pickering, Subha Sen, Rajesh Parmar, Benoit Fatou, Hanno Steen, Joanna Schaenman, Suphamai Bunnapradist, Elaine F. Reed, Minnie M. Sarwal, CMV Systems Immunobiology Group

published 19 May 2023

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The effect of the genomic GC content bias of prokaryotic organisms on the secondary structures of their proteins

Diana Barceló-Antemate, Fernando Fontove-Herrera, Walter Santos, Enrique Merino

published 04 May 2023

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MTSviewer: A database to visualize mitochondrial targeting sequences, cleavage sites, and mutations on protein structures

Andrew N. Bayne, Jing Dong, Saeid Amiri, Sali M. K. Farhan, Jean-François Trempe

published 24 Apr 2023

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Comprehensive proteomic analysis of autophagosomes derived from Leishmania-infected macrophages

Devki Nandan, Eleanor Chen, Fabian Chang, Kyung-Mee Moon, Leonard J. Foster, Neil Reiner

published 07 Apr 2023

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Functionally distinct BMP1 isoforms show an opposite pattern of abundance in plasma from non-small cell lung cancer subjects and controls

Margaret K. R. Donovan, Yingxiang Huang, John E. Blume, Jian Wang, Daniel Hornburg, Shadi Ferdosi, Iman Mohtashemi, Sangtae Kim, Marwin Ko, Ryan W. Benz, Theodore L. Platt, Serafim Batzoglou, Luis A. Diaz, Omid C. Farokhzad, Asim Siddiqui

published 29 Mar 2023

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Using the Culex pipiens sperm proteome to identify elements essential for mosquito reproduction

Catherine D. Thaler, Kaira Carstens, Gabrielle Martinez, Kimberly Stephens, Richard A. Cardullo

published 16 Feb 2023

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Chromoplast plastoglobules recruit the carotenoid biosynthetic pathway and contribute to carotenoid accumulation during tomato fruit maturation

Wayne Zita, Ségolène Bressoud, Gaetan Glauser, Felix Kessler, Venkatasalam Shanmugabalaji

published 06 Dec 2022

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Label-free quantitative proteomics and stress responses in pigs—The case of short or long road transportation

Alessio Di Luca, Andrea Ianni, Michael Henry, Camillo Martino, Paula Meleady, Giuseppe Martino

published 23 Nov 2022

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Characterization of peptide-protein relationships in protein ambiguity groups via bipartite graphs

Karin Schork, Michael Turewicz, Julian Uszkoreit, Jörg Rahnenführer, Martin Eisenacher

published 21 Oct 2022

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