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Protein sequencing

In vitro and molecular modeling insights into α-amylase inhibition by tamarind seed-derived trypsin inhibitor: Implications for hyperglycemic control

Larissa Aida Lemos de Souza, Caio Patrício de Souza Sena, [ ... ], Ana Heloneida de Araujo Morais

Bag-of-words is competitive with sum-of-embeddings language-inspired representations on protein inference

Frixos Papadopoulos, Tilman Sanchez-Elsner, Mahesan Niranjan, Ashley I. Heinson

Machine learning reveals distinct T-cell receptor clusters in plasma cell dyscrasias compared to healthy controls

David G. Coffey, Yong Zhang, [ ... ], Dickran Kazandjian

A descriptor-free machine learning framework to improve antigen discovery for bacterial pathogens

Marco Podda, Castrense Savojardo, [ ... ], Alessandro Brozzi

Optimizing lipocalin sequence classification with ensemble deep learning models

Yonglin Zhang, Lezheng Yu, [ ... ], Jiesi Luo

A methodology for calculating the rarity of diverse proteins based on functional specificity and thermodynamic stability

Brian J. Miller

Framework for analyzing MAE-derived immunopeptidomes from cell lines with shared HLA haplotypes

Queenie W. T. Chan, Teesha C. Baker, [ ... ], Leonard J. Foster

Classification of virulence factors based on dual-channel neural networks with pre-trained language models

Guanghui Li, Peiyang Song, Jiawei Luo, Cheng Liang

Qualitative analysis of genomic mutations and antibiotic susceptibility testing of Pseudomonas aeruginosa isolates from chronic lung infections

Ad C. Fluit, Jumamurat R. Bayjanov, [ ... ], Miquel B. Ekkelenkamp

Computational modelling of the equine arteritis virus GP5/M Dimer: Implications for immune evasion and virulence

Michael Veit, Anna Karolina Matczuk

Comparative analysis of the diversity within the B. bronchiseptica fimX locus

Tracy L. Nicholson, Sarah M. Shore

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