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Protein sequencing

Evaluation of VP4-VP2 sequencing for molecular typing of human enteroviruses

Kouichi Kitamura, Minetaro Arita

published 10 Dec 2024

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A percolation theory analysis of continuous functional paths in protein sequence space affirms previous insights on the optimization of proteins for adaptability

Brian J. Miller

published 05 Dec 2024

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StackIL10: A stacking ensemble model for the improved prediction of IL-10 inducing peptides

Izaz Ahmmed Tuhin, Md. Rajib Mia, Md. Monirul Islam, Imran Mahmud, Henry Fabian Gongora, Carlos Uc Rios, Imran Ashraf, Md. Abdus Samad

published 14 Nov 2024

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PredIL13: Stacking a variety of machine and deep learning methods with ESM-2 language model for identifying IL13-inducing peptides

Hiroyuki Kurata, Md. Harun-Or-Roshid, Sho Tsukiyama, Kazuhiro Maeda

published 22 Aug 2024

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Effect of light on ascorbic acid biosynthesis and bioinformatics analysis of related genes in Chinese chives

Yuxuan Qian, Jing Tong, Ning Liu, Baoju Wang, Yanhai Ji, Zhanhui Wu

published 22 Aug 2024

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Characterization of BrGH3A, a bovine rumen-derived glycoside hydrolase family 3 β-glucosidase with a permuted domain arrangement

Phiraya Pitchayatanakorn, Eukote Suwan, Prachumporn T. Kongsaeree

published 09 Jul 2024

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Investigating molecular descriptors in cell-penetrating peptides prediction with deep learning: Employing N, O, and hydrophobicity according to the Eisenberg scale

Juliana Auzier Seixas Feio, Ewerton Cristhian Lima de Oliveira, Claudomiro de Souza de Sales Junior, Kauê Santana da Costa, Anderson Henrique Lima e Lima

published 13 Jun 2024

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Several supplementary concepts for applied category-theoretical states over an extended Petri net using an example relating to genetic coding: Toward an abstract algebraic formulation of molecular/genetic biology

Jitsuki Sawamura, Shigeru Morishita, Jun Ishigooka

published 07 Jun 2024

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Understanding the genetic sex-determining mechanism in Hyla eximia treefrog inferred from H-Y antigen

Aidet Ruiz, Guadalupe Cárdenas, Desiderio Velasco, Luis Ramos

published 31 May 2024

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E-CLEAP: An ensemble learning model for efficient and accurate identification of antimicrobial peptides

Si-Cheng Wang

published 09 May 2024

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Analysis the molecular similarity of least common amino acid sites in ACE2 receptor to predict the potential susceptible species for SARS-CoV-2

YeZhi Hu, Arivizhivendhan Kannan Villalan, Xin Fan, Shuang Zhang, Fekede Regassa Joka, XiaoDong Wu, HaoNing Wang, XiaoLong Wang

published 02 May 2024

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Polyaminated, acetylated and stop codon readthrough of recombinant Francisella tularensis universal stress protein in Escherichia coli

Benjamin Girardo, Lawrence M. Schopfer, Yinshi Yue, Oksana Lockridge, Marilynn A. Larson

published 29 Apr 2024

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A trimeric glycosylated GH45 cellulase from the red abalone (Haliotis rufescens) exhibits endo and exoactivity

L. Joshua Hernández-Benítez, Miguel A. Ramírez-Rodríguez, Alejandra Hernández-Santoyo, Adela Rodríguez-Romero

published 18 Apr 2024

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