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Programming languages

PopSc: Computing Toolkit for Basic Statistics of Molecular Population Genetics Simultaneously Implemented in Web-Based Calculator, Python and R

Shi-Yi Chen, Feilong Deng, Ying Huang, Cao Li, Linhai Liu, Xianbo Jia, Song-Jia Lai

published 28 Oct 2016

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Language-Agnostic Reproducible Data Analysis Using Literate Programming

Boris Vassilev, Riku Louhimo, Elina Ikonen, Sampsa Hautaniemi

published 06 Oct 2016

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SeqKit: A Cross-Platform and Ultrafast Toolkit for FASTA/Q File Manipulation

Wei Shen, Shuai Le, Yan Li, Fuquan Hu

published 05 Oct 2016

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Concurrent Validity and Feasibility of Short Tests Currently Used to Measure Early Childhood Development in Large Scale Studies

Marta Rubio-Codina, M. Caridad Araujo, Orazio Attanasio, Pablo Muñoz, Sally Grantham-McGregor

published 22 Aug 2016

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Collapse of Corroded Pipelines under Combined Tension and External Pressure

Hao Ye, Sunting Yan, Zhijiang Jin

published 25 Apr 2016

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Inequalities in Open Source Software Development: Analysis of Contributor’s Commits in Apache Software Foundation Projects

Tadeusz Chełkowski, Peter Gloor, Dariusz Jemielniak

published 20 Apr 2016

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Parallel and Scalable Short-Read Alignment on Multi-Core Clusters Using UPC++

Jorge González-Domínguez, Yongchao Liu, Bertil Schmidt

published 05 Jan 2016

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SPOTting Model Parameters Using a Ready-Made Python Package

Tobias Houska, Philipp Kraft, Alejandro Chamorro-Chavez, Lutz Breuer

published 17 Dec 2015

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CloudForest: A Scalable and Efficient Random Forest Implementation for Biological Data

Ryan Bressler, Richard B. Kreisberg, Brady Bernard, John E. Niederhuber, Joseph G. Vockley, Ilya Shmulevich, Theo A. Knijnenburg

published 17 Dec 2015

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How Do Changes to the Railroad Causeway in Utah’s Great Salt Lake Affect Water and Salt Flow?

James S. White, Sarah E. Null, David G. Tarboton

published 07 Dec 2015

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miRLocator: Machine Learning-Based Prediction of Mature MicroRNAs within Plant Pre-miRNA Sequences

Haibo Cui, Jingjing Zhai, Chuang Ma

published 11 Nov 2015

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Evaluation of Nine Consensus Indices in Delphi Foresight Research and Their Dependency on Delphi Survey Characteristics: A Simulation Study and Debate on Delphi Design and Interpretation

Stanislav Birko, Edward S. Dove, Vural Özdemir

published 13 Aug 2015

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Speeding Up Non-Parametric Bootstrap Computations for Statistics Based on Sample Moments in Small/Moderate Sample Size Applications

Elias Chaibub Neto

published 30 Jun 2015

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