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Phylogenetics

The Effect of Inappropriate Calibration: Three Case Studies in Molecular Ecology

Simon Y. W. Ho, Urmas Saarma, [ ... ], Beth Shapiro

An Update on MyoD Evolution in Teleosts and a Proposed Consensus Nomenclature to Accommodate the Tetraploidization of Different Vertebrate Genomes

Daniel J. Macqueen, Ian A. Johnston

Evolution and Diversity of Clonal Bacteria: The Paradigm of Mycobacterium tuberculosis

Tiago Dos Vultos, Olga Mestre, [ ... ], Brigitte Gicquel

Homology Modeling of Dissimilatory APS Reductases (AprBA) of Sulfur-Oxidizing and Sulfate-Reducing Prokaryotes

Birte Meyer, Jan Kuever

Evolution of a Complex Locus: Exon Gain, Loss and Divergence at the Gr39a Locus in Drosophila

Anastasia Gardiner, Daniel Barker, [ ... ], Michael G. Ritchie

Genome-Wide Survey and Developmental Expression Mapping of Zebrafish SET Domain-Containing Genes

Xiao-Jian Sun, Peng-Fei Xu, [ ... ], Zhu Chen

Natural Selection and Adaptive Evolution of Leptin in the Ochotona Family Driven by the Cold Environmental Stress

Jie Yang, Zhen Long Wang, [ ... ], Hui Fang Tian

Y-Chromosome Based Evidence for Pre-Neolithic Origin of the Genetically Homogeneous but Diverse Sardinian Population: Inference for Association Scans

Daniela Contu, Laura Morelli, [ ... ], Francesco Cucca

High-Resolution Molecular Epidemiology and Evolutionary History of HIV-1 Subtypes in Albania

Marco Salemi, Tulio de Oliveira, [ ... ], Maureen M. Goodenow

Whole-Gene Positive Selection, Elevated Synonymous Substitution Rates, Duplication, and Indel Evolution of the Chloroplast clpP1 Gene

Per Erixon, Bengt Oxelman

Genetic Evidence for a Mitochondriate Ancestry in the ‘Amitochondriate’ Flagellate Trimastix pyriformis

Vladimir Hampl, Jeffrey D. Silberman, [ ... ], Andrew J. Roger

Genome Evolution and the Emergence of Fruiting Body Development in Myxococcus xanthus

Barry Goldman, Swapna Bhat, Lawrence J. Shimkets

Multi-Locus Sequence Typing of Bartonella henselae Isolates from Three Continents Reveals Hypervirulent and Feline-Associated Clones

Mardjan Arvand, Edward J. Feil, [ ... ], Juliane Viezens

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