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Phylogenetics

Genomic Characterization of Methanomicrobiales Reveals Three Classes of Methanogens

Iain Anderson, Luke E. Ulrich, [ ... ], Nikos Kyrpides

Improved Resolution Haplogroup G Phylogeny in the Y Chromosome, Revealed by a Set of Newly Characterized SNPs

Lynn M. Sims, Dennis Garvey, Jack Ballantyne

Evidence of Molecular Evolution Driven by Recombination Events Influencing Tropism in a Novel Human Adenovirus that Causes Epidemic Keratoconjunctivitis

Michael P. Walsh, Ashish Chintakuntlawar, [ ... ], Morris S. Jones

The Impact of Outgroup Choice and Missing Data on Major Seed Plant Phylogenetics Using Genome-Wide EST Data

Jose Eduardo de la Torre-Bárcena, Sergios-Orestis Kolokotronis, [ ... ], Rob DeSalle

Origin of Saxitoxin Biosynthetic Genes in Cyanobacteria

Ahmed Moustafa, Jeannette E. Loram, [ ... ], Debashish Bhattacharya

Gene Classification Based on Amino Acid Motifs and Residues: The DLX (distal-less) Test Case

Nuno A. Fonseca, Cristina P. Vieira, Jorge Vieira

Structure-Based Phylogeny as a Diagnostic for Functional Characterization of Proteins with a Cupin Fold

Garima Agarwal, Malligarjunan Rajavel, Balasubramanian Gopal, Narayanaswamy Srinivasan

Phylogeny and Biogeography of Hawkmoths (Lepidoptera: Sphingidae): Evidence from Five Nuclear Genes

Akito Y. Kawahara, Andre A. Mignault, [ ... ], Charles Mitter

HIV-1 Superinfection in the Antiretroviral Therapy Era: Are Seroconcordant Sexual Partners at Risk?

Mary S. Campbell, Geoffrey S. Gottlieb, [ ... ], James I. Mullins

Genetic Diversity of Staphylocoagulase Genes (coa): Insight into the Evolution of Variable Chromosomal Virulence Factors in Staphylococcus aureus

Shinya Watanabe, Teruyo Ito, [ ... ], Keiichi Hiramatsu

Using Phylogenetic, Functional and Trait Diversity to Understand Patterns of Plant Community Productivity

Marc W. Cadotte, Jeannine Cavender-Bares, David Tilman, Todd H. Oakley

Uncinate Process Length in Birds Scales with Resting Metabolic Rate

Peter Tickle, Robert Nudds, Jonathan Codd

Paleogenomics in a Temperate Environment: Shotgun Sequencing from an Extinct Mediterranean Caprine

Oscar Ramírez, Elena Gigli, [ ... ], Carles Lalueza-Fox

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