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Phylogenetics

An Evolutionary View on Disulfide Bond Connectivities Prediction Using Phylogenetic Trees and a Simple Cysteine Mutation Model

Daniele Raimondi, Gabriele Orlando, Wim F. Vranken

published 10 Jul 2015

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Against All Odds: Trehalose-6-Phosphate Synthase and Trehalase Genes in the Bdelloid Rotifer Adineta vaga Were Acquired by Horizontal Gene Transfer and Are Upregulated during Desiccation

Boris Hespeels, Xiang Li, Jean-François Flot, Lise-Marie Pigneur, Jeremy Malaisse, Corinne Da Silva, Karine Van Doninck

published 10 Jul 2015

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Using Whole Genome Analysis to Examine Recombination across Diverse Sequence Types of Staphylococcus aureus

Elizabeth M. Driebe, Jason W. Sahl, Chandler Roe, Jolene R. Bowers, James M. Schupp, John D. Gillece, Erin Kelley, Lance B. Price, Talima R. Pearson, Crystal M. Hepp, Pius M. Brzoska, Craig A. Cummings, Manohar R. Furtado, Paal S. Andersen, Marc Stegger, David M. Engelthaler, Paul S. Keim

published 10 Jul 2015

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Phylogeny and New Classification of Hydrothermal Vent and Seep Shrimps of the Family Alvinocarididae (Decapoda)

Alexander L. Vereshchaka, Dmitry N. Kulagin, Anastasia A. Lunina

published 10 Jul 2015

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The Taxonomic and Phylogenetic Affinities of Bunopithecus sericus, a Fossil Hylobatid from the Pleistocene of China

Alejandra Ortiz, Varsha Pilbrow, Catalina I. Villamil, Jessica G. Korsgaard, Shara E. Bailey, Terry Harrison

published 08 Jul 2015

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Cranial Anatomy of Wendiceratops pinhornensis gen. et sp. nov., a Centrosaurine Ceratopsid (Dinosauria: Ornithischia) from the Oldman Formation (Campanian), Alberta, Canada, and the Evolution of Ceratopsid Nasal Ornamentation

David C. Evans, Michael J. Ryan

published 08 Jul 2015

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Genome Scan for Selection in Structured Layer Chicken Populations Exploiting Linkage Disequilibrium Information

Mahmood Gholami, Christian Reimer, Malena Erbe, Rudolf Preisinger, Annett Weigend, Steffen Weigend, Bertrand Servin, Henner Simianer

published 07 Jul 2015

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A Century of Shope Papillomavirus in Museum Rabbit Specimens

Clara Escudero Duch, Richard A. J. Williams, Robert M. Timm, Javier Perez-Tris, Laura Benitez

published 06 Jul 2015

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The Mitochondrial Genomes of a Myxozoan Genus Kudoa Are Extremely Divergent in Metazoa

Fumihiko Takeuchi, Tsuyoshi Sekizuka, Yumiko Ogasawara, Hiroshi Yokoyama, Ryoma Kamikawa, Yuji Inagaki, Tomoyoshi Nozaki, Yoshiko Sugita-Konishi, Takahiro Ohnishi, Makoto Kuroda

published 06 Jul 2015

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Occult Hepatitis B Virus Infection in Nigerian Blood Donors and Hepatitis B Virus Transmission Risks

Opaleye O. Oluyinka, Hoang Van Tong, Sy Bui Tien, Ademola H. Fagbami, Olusegun Adekanle, Olusola Ojurongbe, C.-Thomas Bock, Peter G. Kremsner, Thirumalaisamy P. Velavan

published 06 Jul 2015

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Comparative Genomic Analyses of Multiple Pseudomonas Strains Infecting Corylus avellana Trees Reveal the Occurrence of Two Genetic Clusters with Both Common and Distinctive Virulence and Fitness Traits

Simone Marcelletti, Marco Scortichini

published 06 Jul 2015

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Molecular Identification of Atlantic Bluefin Tuna (Thunnus thynnus, Scombridae) Larvae and Development of a DNA Character-Based Identification Key for Mediterranean Scombrids

Gregory Neils Puncher, Haritz Arrizabalaga, Francisco Alemany, Alessia Cariani, Isik K. Oray, F. Saadet Karakulak, Gualtiero Basilone, Angela Cuttitta, Salvatore Mazzola, Fausto Tinti

published 06 Jul 2015

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MLgsc: A Maximum-Likelihood General Sequence Classifier

Thomas Junier, Vincent Hervé, Tina Wunderlin, Pilar Junier

published 06 Jul 2015

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