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Phylogenetics

Non-Negative Matrix Factorization for Learning Alignment-Specific Models of Protein Evolution

Ben Murrell, Thomas Weighill, [ ... ], Konrad Scheffler

Tasting Soil Fungal Diversity with Earth Tongues: Phylogenetic Test of SATé Alignments for Environmental ITS Data

Zheng Wang, R. Henrik Nilsson, [ ... ], Jeffrey P. Townsend

The cranial anatomy and relationships of Cardiocorax mukulu (Plesiosauria: Elasmosauridae) from Bentiaba, Angola

Miguel P. Marx, Octávio Mateus, [ ... ], Louis L. Jacobs

Unexpected associated microalgal diversity in the lichen Ramalina farinacea is uncovered by pyrosequencing analyses

Patricia Moya, Arántzazu Molins, [ ... ], Eva Barreno

Resolving Discrepancy between Nucleotides and Amino Acids in Deep-Level Arthropod Phylogenomics: Differentiating Serine Codons in 21-Amino-Acid Models

Andreas Zwick, Jerome C. Regier, Derrick J. Zwickl

Does the Arcto-Tertiary Biogeographic Hypothesis Explain the Disjunct Distribution of Northern Hemisphere Herbaceous Plants? The Case of Meehania (Lamiaceae)

Tao Deng, Ze-Long Nie, [ ... ], Hang Sun

Comparative Analyses of Reproductive Structures in Harvestmen (Opiliones) Reveal Multiple Transitions from Courtship to Precopulatory Antagonism

Mercedes M. Burns, Marshal Hedin, Jeffrey W. Shultz

Symbiotic Virus at the Evolutionary Intersection of Three Types of Large DNA Viruses; Iridoviruses, Ascoviruses, and Ichnoviruses

Yves Bigot, Sylvaine Renault, [ ... ], Brian A. Federici

Disparate gain and loss of parasitic abilities among nematode lineages

Martijn Holterman, Akbar Karegar, [ ... ], Johannes Helder

A bushel of viruses: Identification of seventeen novel putative viruses by RNA-seq in six apple trees

Alice A. Wright, Alex R. Cross, Scott J. Harper

No Ancient DNA Damage in Actinobacteria from the Neanderthal Bone

Katarzyna Zaremba-Niedźwiedzka, Siv G. E. Andersson

First Isolation of Hepatitis E Virus Genotype 4 in Europe through Swine Surveillance in the Netherlands and Belgium

Renate W. Hakze-van der Honing, Els van Coillie, Adriaan F. G. Antonis, Wim H. M. van der Poel

Comparative analysis of NBS-LRR genes and their response to Aspergillus flavus in Arachis

Hui Song, Pengfei Wang, [ ... ], Xingjun Wang

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