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Phylogenetics

Whole genome-based reclassification of several species of the genus Nonomuraea

Noureddine Bouras, Imen Nouioui, Guendouz Dif, Fawzia Chaabane Chaouch, Sherif S. Ebada

published 01 Jul 2025

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The cytological analysis of crossing over in armadillos supports the existence of a phylogenetic component of recombination rates in mammals

Luis Francisco Rossi, María Inés Pigozzi

published 26 Jun 2025

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Characterization of Congregicoccus parvus gen. nov., sp. nov., a novel slow-growing ultramicrobacterium of the phylum Verrucomicrobiota

Md. Samiul Islam, Kyosuke Yamamoto, Naoki Morita, Wataru Kitagawa, Isao Yumoto, Souichiro Kato, Ryosuke Nakai, Kensuke Igarashi

published 25 Jun 2025

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The 2 Sigma Genus Concept in mammalogy: Lessons from Lasiurus

Amy B. Baird, Janet K. Braun, Mark D. Engstrom, Burton K. Lim, Michael A. Mares, Luis A. Ruedas, John C. Patton, John W. Bickham

published 25 Jun 2025

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Genetic variability in microbial eukaryotes reshapes marine biodiversity assessment in the age of amplicon sequencing

Sarah Trubovitz, Miguel M. Sandin, David A. Caron

published 20 Jun 2025

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Genetic diversity and phylogenetic relationships of Calotes and Uromastyx in the Cholistan Desert, Pakistan, based on COI gene analysis

Javed Hussain, Gulnaz Afzal, Muhammad Zeshan Haider, Iram Qadeer, Shazia Perveen, Hafiz Ishfaq Ahmad, Ahmed A. El-Mansi, Abdelalim A. Gadallah, Kasim Sakran Abass

published 17 Jun 2025

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Amplicon sequencing of pasteurized retail dairy enables genomic surveillance of H5N1 avian influenza virus in United States cattle

Andrew J. Lail, William C. Vuyk, Heather Machkovech, Nicholas R. Minor, Nura R. Hassan, Rhea Dalvie, Isla E. Emmen, Sydney Wolf, Annabelle Kalweit, Nancy Wilson, Christina M. Newman, Patrick Barros Tiburcio, Andrea Weiler, Thomas C. Friedrich, David H. O’Connor

published 13 Jun 2025

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Phylogeny, phylogeography, and conservation of a rediscovered gecko from the Galápagos Islands

Omar Torres-Carvajal, Paula A. Castaño, Enrique Rincón, Fernando Ayala-Varela, Karl Campbell, Wilson Cabrera, Francisco Moreno

published 13 Jun 2025

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AvianLexiconAtlas: A database of descriptive categories of English-language bird names around the world

Erin S. Morrison, Guinevere P. Pandolfi, Stepfanie M. Aguillon, Jarome R. Ali, Olivia Archard, Daniel T. Baldassarre, Illeana Baquero, Kevin F. P. Bennett, Kevin M. Bonney, Riley Bryant, Rosanne M. Catanach, Therese A. Catanach, Ida Chavoshan, Sarah N. Davis, Brooke D. Goodman, Eric R. Gulson-Castillo, Matthew Hack, Jocelyn Hudon, Gavin M. Leighton, Kira M. Long, Ziqi Ma, Dakota E. McCoy, J. F. McLaughlin, Gaia Rueda Moreno, Talia M. Mota, Lara Noguchi, Ugo Nwigwe, Teresa Pegan, Kaiya L. Provost, Shauna A. Rasband, Jessie Frances Salter, Lauren C. Silvernail, Jared A. Simard, Heather R. Skeen, Juliana Soto-Patiño, Young Ha Suh, Qingyue Wang, Matthew E. Warshauer, Sissy Yan, Betsy Zalinski, Ziqi Zhao, Allison J. Shultz

published 11 Jun 2025

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Assembly and analysis of the complete mitochondrial and chloroplast genomes of Vigna reflexo-pilosa

Panthita Ruang-areerate, Suparat Pinsupa, Wasitthee Kongkachana, Thippawan Yoocha, Phakamas Phetchawang, Peeraphat Paenpong, Prakit Somta, Kularb Laosatit, Sithichoke Tangphatsornruang, Wirulda Pootakham

published 11 Jun 2025

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Flowering seasonality drives taxonomic, functional, and phylogenetic diversity of hummingbirds along an altitudinal gradient in northwestern Mexico

Gabriel López-Segoviano, Laura E. Nuñez-Rosas, Maribel Arenas-Navarro, Guillermo Huerta-Ramos, María del Coro Arizmendi

published 11 Jun 2025

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Comparative genomics of Lentilactobacillus buchneri reveals strain-level hyperdiversity and broad-spectrum CRISPR immunity against human and livestock gut phages

Ismail Gumustop, Ibrahim Genel, Ibrahim Cagri Kurt, Fatih Ortakci

published 10 Jun 2025

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Variant evolution graph: Can we infer how SARS-CoV-2 variants are evolving?

Badhan Das, Lenwood S. Heath

published 09 Jun 2025

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