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Phylogenetic analysis

Mitochondrial genome of eight Carangidae and phylogenetic analysis in the family

Fangcao Zhao, Lin Xian, Kecheng Zhu, Nan Zhang, Huayang Guo, Baosuo Liu, Jingwen Yang, Bo Liu, Dianchang Zhang

published 09 Jul 2025

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Predator-prey transmission of a gammaherpesvirus from Asian badgers (Meles leucurus) to endangered Amur tigers (Panthera tigris altaica)

Martin Gilbert, Malcolm A.M. Hill, Leah Y.N. Cheung, Patti K. Kiser, Ivan V. Seryodkin, Dale G. Miquelle, John M. Goodrich, Nadezhda Sulikhan, Olga Uphyrkina, Mikhail Goncharuk, Linda Kerley, Ryan M. Troyer

published 02 Jul 2025

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Development and field application of metabarcoding-adapted mt-ND4 markers shows substantial gene flow and varying local pressures on Haemonchus contortus and Teladorsagia circumcincta populations in the UK

Osama Zahid, Umer Chaudhry, Neil Donald Sargison

published 02 Jul 2025

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Whole genome-based reclassification of several species of the genus Nonomuraea

Noureddine Bouras, Imen Nouioui, Guendouz Dif, Fawzia Chaabane Chaouch, Sherif S. Ebada

published 01 Jul 2025

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Characterization of Congregicoccus parvus gen. nov., sp. nov., a novel slow-growing ultramicrobacterium of the phylum Verrucomicrobiota

Md. Samiul Islam, Kyosuke Yamamoto, Naoki Morita, Wataru Kitagawa, Isao Yumoto, Souichiro Kato, Ryosuke Nakai, Kensuke Igarashi

published 25 Jun 2025

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Genetic variability in microbial eukaryotes reshapes marine biodiversity assessment in the age of amplicon sequencing

Sarah Trubovitz, Miguel M. Sandin, David A. Caron

published 20 Jun 2025

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Genetic diversity and phylogenetic relationships of Calotes and Uromastyx in the Cholistan Desert, Pakistan, based on COI gene analysis

Javed Hussain, Gulnaz Afzal, Muhammad Zeshan Haider, Iram Qadeer, Shazia Perveen, Hafiz Ishfaq Ahmad, Ahmed A. El-Mansi, Abdelalim A. Gadallah, Kasim Sakran Abass

published 17 Jun 2025

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Amplicon sequencing of pasteurized retail dairy enables genomic surveillance of H5N1 avian influenza virus in United States cattle

Andrew J. Lail, William C. Vuyk, Heather Machkovech, Nicholas R. Minor, Nura R. Hassan, Rhea Dalvie, Isla E. Emmen, Sydney Wolf, Annabelle Kalweit, Nancy Wilson, Christina M. Newman, Patrick Barros Tiburcio, Andrea Weiler, Thomas C. Friedrich, David H. O’Connor

published 13 Jun 2025

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Phylogeny, phylogeography, and conservation of a rediscovered gecko from the Galápagos Islands

Omar Torres-Carvajal, Paula A. Castaño, Enrique Rincón, Fernando Ayala-Varela, Karl Campbell, Wilson Cabrera, Francisco Moreno

published 13 Jun 2025

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Assembly and analysis of the complete mitochondrial and chloroplast genomes of Vigna reflexo-pilosa

Panthita Ruang-areerate, Suparat Pinsupa, Wasitthee Kongkachana, Thippawan Yoocha, Phakamas Phetchawang, Peeraphat Paenpong, Prakit Somta, Kularb Laosatit, Sithichoke Tangphatsornruang, Wirulda Pootakham

published 11 Jun 2025

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Comparative genomics of Lentilactobacillus buchneri reveals strain-level hyperdiversity and broad-spectrum CRISPR immunity against human and livestock gut phages

Ismail Gumustop, Ibrahim Genel, Ibrahim Cagri Kurt, Fatih Ortakci

published 10 Jun 2025

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Variant evolution graph: Can we infer how SARS-CoV-2 variants are evolving?

Badhan Das, Lenwood S. Heath

published 09 Jun 2025

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Machine learning techniques for continuous genetic assignment of geographic origin of forest trees

Bernd Degen, Yulai Yanbaev, Niels A. Müller

published 06 Jun 2025

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