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Phylogenetic analysis

Environmental Adaptation: Genomic Analysis of the Piezotolerant and Psychrotolerant Deep-Sea Iron Reducing Bacterium Shewanella piezotolerans WP3

Fengping Wang, Jianbin Wang, [ ... ], Xiang Xiao

A Comparison of Phylogenetic Network Methods Using Computer Simulation

Steven M. Woolley, David Posada, Keith A. Crandall

Australia's Oldest Marsupial Fossils and their Biogeographical Implications

Robin M. D. Beck, Henk Godthelp, [ ... ], Suzanne J. Hand

Ancient DNA Elucidates the Controversy about the Flightless Island Hens (Gallinula sp.) of Tristan da Cunha

Dick S. J. Groenenberg, Albert J. Beintema, René W. R. J. Dekker, Edmund Gittenberger

Architecture of an Antagonistic Tree/Fungus Network: The Asymmetric Influence of Past Evolutionary History

Corinne Vacher, Dominique Piou, Marie-Laure Desprez-Loustau

Tempo and Mode of Diversification of Lake Tanganyika Cichlid Fishes

Julia J. Day, James A. Cotton, Timothy G. Barraclough

Influenza A H5N1 Immigration Is Filtered Out at Some International Borders

Robert G. Wallace, Walter M. Fitch

Diversity Arrays Technology (DArT) for Pan-Genomic Evolutionary Studies of Non-Model Organisms

Karen E. James, Harald Schneider, [ ... ], Andrzej Kilian

Recombination and Population Mosaic of a Multifunctional Viral Gene, Adeno-Associated Virus cap

Yasuhiro Takeuchi, Richard Myers, Olivier Danos

Sequence Evidence in the Archaeal Genomes that tRNAs Emerged Through the Combination of Ancestral Genes as 5′ and 3′ tRNA Halves

Kosuke Fujishima, Junichi Sugahara, Masaru Tomita, Akio Kanai

The Effect of Inappropriate Calibration: Three Case Studies in Molecular Ecology

Simon Y. W. Ho, Urmas Saarma, [ ... ], Beth Shapiro

An Update on MyoD Evolution in Teleosts and a Proposed Consensus Nomenclature to Accommodate the Tetraploidization of Different Vertebrate Genomes

Daniel J. Macqueen, Ian A. Johnston

Evolution of a Complex Locus: Exon Gain, Loss and Divergence at the Gr39a Locus in Drosophila

Anastasia Gardiner, Daniel Barker, [ ... ], Michael G. Ritchie

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