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Phylogenetic analysis

Evidence for Positive Selection in the C-terminal Domain of the Cholesterol Metabolism Gene PCSK9 Based on Phylogenetic Analysis in 14 Primate Species

Keyue Ding, Samantha J. McDonough, Iftikhar J. Kullo

Horizontal Transfer of a Nitrate Assimilation Gene Cluster and Ecological Transitions in Fungi: A Phylogenetic Study

Jason C. Slot, David S. Hibbett

Phylogenetic Analysis of the Neks Reveals Early Diversification of Ciliary-Cell Cycle Kinases

Jeremy D. K. Parker, Brian A. Bradley, Arne O. Mooers, Lynne M. Quarmby

Ancestral Inference and the Study of Codon Bias Evolution: Implications for Molecular Evolutionary Analyses of the Drosophila melanogaster Subgroup

Hiroshi Akashi, Piyush Goel, Anoop John

The Origins of Novel Protein Interactions during Animal Opsin Evolution

David C. Plachetzki, Bernard M. Degnan, Todd H. Oakley

Demographic Histories of ERV-K in Humans, Chimpanzees and Rhesus Monkeys

Camila M. Romano, Fernando L. de Melo, [ ... ], Paolo M. de A. Zanotto

Molecular Analysis of a Leprosy Immunotherapeutic Bacillus Provides Insights into Mycobacterium Evolution

Niyaz Ahmed, Vikram Saini, [ ... ], Seyed E. Hasnain

A Diverse Group of Previously Unrecognized Human Rhinoviruses Are Common Causes of Respiratory Illnesses in Infants

Wai-Ming Lee, Christin Kiesner, [ ... ], James E. Gern

Phylodynamics of HIV-1 in Lymphoid and Non-Lymphoid Tissues Reveals a Central Role for the Thymus in Emergence of CXCR4-Using Quasispecies

Marco Salemi, Brant R. Burkhardt, [ ... ], Maureen M. Goodenow

Early Evolution of Ionotropic GABA Receptors and Selective Regimes Acting on the Mammalian-Specific Theta and Epsilon Subunits

Christopher J. Martyniuk, Stéphane Aris-Brosou, [ ... ], Vance L. Trudeau

Impedance-Matching Hearing in Paleozoic Reptiles: Evidence of Advanced Sensory Perception at an Early Stage of Amniote Evolution

Johannes Müller, Linda A. Tsuji

Degeneration of the Olfactory Guanylyl Cyclase D Gene during Primate Evolution

Janet M. Young, Hang Waters, [ ... ], Emily R. Liman

Dating Phylogenies with Hybrid Local Molecular Clocks

Stéphane Aris-Brosou

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