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Phylogenetic analysis

A novel algorithm for model uncertainty reduction in trapezoidal fuzzy fault tree risk assessment

Yuanyuan Zhang, Long Zhao, Tao Zhang, Wencheng Li

published 15 Dec 2025

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Sticking our nose into the Sonorini tribe: A new genus and species of snake (Squamata: Colubridae: Sonorini) from the Balsas Basin of Mexico

Antonio Y. Cisneros-Bernal, Ricardo Palacios-Aguilar, Carlos Hernández-Jiménez, Eric N. Smith, Oscar Flores-Villela, Cristian Hernández-Morales, Oscar Olivares Loyola, Gustavo Campillo-García

published 10 Dec 2025

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Seasonal dynamics and genetic diversity of human adenoviruses in patients with acute respiratory infection in Thailand, 2024

Jiratchaya Puenpa, Lita Tantipraphat, Ratchadawan Aeemjinda, Preeyaporn Vichaiwattana, Sumeth Korkong, Yong Poovorawan

published 09 Dec 2025

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Chloroplast genome analysis and phylogenetic position of Polygonatum sinopubescens and comparison with related species

Zhong-Mei Mo, Chun-Mou Wei, Hai-Ying Yu, Chuan-Dong Yang

published 05 Dec 2025

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Gagea kotuchovii (Liliaceae) a new species from the Karatau Mountains (western Tian Shan, Kazakhstan) evidenced by morphological and molecular analyses

Serik Kubentayev, Igor Levichev, Shukherdorj Baasanmunkh, Ewelina Klichowska, Daniyar Alibekov, Hyeok Jae Choi, Marcin Nobis

published 05 Dec 2025

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Multi-locus phylogenetic network analysis of Ampelomyces mycoparasites isolated from diverse powdery mildews in Australia and the generation of two de novo genome assemblies

Lauren Goldspink, Alexandros G. Sotiropoulos, Alexander Idnurm, Gavin J. Ash, John D. W. Dearnaley, Morwenna Boddington, Aftab Ahmad, Márk Z. Németh, Alexandra Pintye, Markus Gorfer, Hyeon-Dong Shin, Gábor M. Kovács, Niloofar Vaghefi, Levente Kiss

published 04 Dec 2025

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Rhodococcus aromaticivorans sp. nov., an o-xylene degrading bacterium, and evidence supporting reclassification of Rhodococcus jostii RHA1

Neak Muhammad, Jehyun Jeon, Eungbin Kim, Dockyu Kim, Yung Mi Lee

published 02 Dec 2025

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Factors associated with phylogenetic clustering of hepatitis C virus, mainly among people who inject drugs who access HIV prevention services in South Africa, 2016–2017

Nkosenhle L. Ndlovu, Andrew Scheibe, Harry Hausler, Mark W. Sonderup, C. Wendy Spearman, Katherine Young, Dawie Nel, Jason T. Blackard, Nishi Prabdial-Sing

published 01 Dec 2025

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Sampling informational properties of codon usage through the tree of life

Octavio Martínez, Manuel Humberto Reyes-Valdés, Neftalí Ochoa-Alejo

published 26 Nov 2025

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Taxonomic characterization and cytotoxic potential of Vietnamese Ganoderma ellipsoideum against human breast cancer MCF-7 cells

Trang Thi Thu Nguyen, Phu Tran Vinh Pham, Viet An Thi Nguyen, Trinh Thi Tuyet Nguyen, Linh Thuoc Tran, Phu Chi Hieu Truong, Manh Hung Tran

published 14 Nov 2025

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Rapid on-site universal vertebrate species identification via multi-barcode nanopore sequencing

Emily C. Patterson, Sandrella Morrison-Lanjouw, Mark A. Jobling, Jon H. Wetton

published 11 Nov 2025

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Anopheles barbirostris in Indonesia: A more complex metapopulation than expected

Tri Baskoro Tunggul Satoto, Triwibowo Ambar Garjito, Shinta Shinta, Soleman Landi, Roger Frutos, Sylvie Manguin

published 10 Nov 2025

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Structural and evolutionary constraints shape adaptive landscapes of immune-related genes across mammalian phylogeny

Zhengtian Li, Mubbashar Hassan, Hafiz Ishfaq Ahmad, Muhammad Adnan Ashraf, Akhtar Rasool Asif, Iram Qadeer, Abid Hussain Shahzad, Shaista Abbas, Muhammad Sajid, Abdul Mateen, Irfan Ahmed, Jamal Muhammad, Sayyed Aun Muhammad, Farid S. Ataya

published 07 Nov 2025

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