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Phylogenetic analysis

What did the dove sing to Pope Gregory? Ancestral melody reconstruction in Gregorian chant using Bayesian phylogenetics

Gustavo A. Ballen, Klára Hedvika Mühlová, Jan Hajič jr.

published 29 May 2026

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Progress in the molecular phylogeny of Cotesia acuminata and C. melitaearum cryptic species complexes

Julian Schach, Federica Valerio, Anne Duplouy

published 27 May 2026

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Genome-wide analysis of the invasive fungal pathogen Neopestalotiopsis reveals high genomic diversity, effector repertoires, and the assessment of fungicide resistance risks

Tika B. Adhikari, Norman Muzhinji, Susmita Gaire, Prem B. Magar, Anju Pandey, Swarnalatha Moparthi, Frank J. Louws

published 27 May 2026

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PCR-based detection and phylogenetic analysis of Candidatus Liberibacter asiaticus in citrus orchards across Nepal

Richa Giri, Bal Kumari Oliya, Siddartha Gautam, Krishna Das Manandhar

published 27 May 2026

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Sri Lankan maternal ancestry reveals early migrations from Africa along the Indian Ocean

Anjana Welikala, Shailesh Desai, Amali Fernando, Joanne Kotelawala, Lakshika Jayasekara, Prajjval Pratap Singh, Anoma Jayasoma, Jose Antonio Urban Aragon, David Witonsky, Niraj Rai, Kumaraswamy Thangaraj, Maanasa Raghavan, Gamini Adikari, Kamani H. Tennekoon, Gyaneshwer Chaubey, Ruwandi Ranasinghe

published 26 May 2026

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Range-weighted branch length difference (RWiBaLD), a new method for distinguishing meso-endemism from neo-endemism and paleo-endemism

Brent D. Mishler, Nunzio Knerr, Joseph T. Miller, Andrew H. Thornhill, Shawn W. Laffan

published 22 May 2026

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Burkholderia cepacia complex (Bcc) in goats: First report in Bangladesh

Abdullah Al Mamun, S. M. Sujan Ashraf, Amir Hamza Shuvo, Farhan Ibne Siddique, Hasan Khan, Naeem Ahammed Ibrahim Fahim, Chandra Shaker Chouhan, Farzana Yeasmin, Md. Mahbub Alam, Md Tanvir Rahman, Md. Siddiqur Rahman

published 22 May 2026

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Comparative analysis of seven types of phosphate transporters in forty species from the phylogenetic and transcriptomic perspective

Junyi Ren, Lulu Xie, Fu Li, Siyuan Zhang, Jianchang Gao, Bin Li

published 21 May 2026

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Validating the classics: Accurate reference gene panel for reliable RT-qPCR in Porifera

Kseniia V. Skorentseva, Nikolai P. Melnikov, Alexander V. Ereskovsky, Andrey I. Lavrov, Aleena A. Saidova

published 20 May 2026

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Genomic diversity of Neisseria gonorrhoeae Isolates in Kenya revealed by MLST, NG-MAST, and NG-STAR typing

Mary Wandia Kivata, Fredrick Lunyagi Eyase, Wallace Dimbuson Bulimo, Valerie Oundo, Esther Waguche, Wilton Mwema Mbinda, Margaret Wanjiku Mbuchi

published 19 May 2026

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Phylogeography and population genetics of the white spotted eagle ray, Aetobatus laticeps Gill, 1865, in the Eastern Tropical Pacific

Mateo Vinueza Guarderas, María de Lourdes Torres, María José Pozo Andrade, Adriana Cevallos, Javier Tovar-Ávila, Rossana Maguiño, Daniella Biffi, Carmen González, Sebastián Hernández, Diana A. Pazmiño

published 18 May 2026

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Trypanosomatid species infecting bats in the Fiocruz Atlantic Forest Biological Station, an urban forested fragment in Rio de Janeiro, Brazil

Alice Pereira Berbigier, Juliana Helena da Silva Barros, Roberto Leonan Morim Novaes, Ricardo Moratelli, Bruno Alves, Cristiane Varella Lisboa, Ana Maria Jansen, André Luiz Rodrigues Roque

published 18 May 2026

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An entropy-based framework for genomic variability analysis: A South American case study of human papillomavirus

Alan López Leal, Elizabeth Valdés-Muñoz, Jorge Y. Faundez-Acuña, Víctor Rojas-Pérez, Vivían D´ Afonseca, Fabián Silva-Aravena

published 15 May 2026

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