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Pathogens

Bayesian networks for predicting clinical outcomes in COVID-19 patients: A retrospective study in a resource-limited setting

Tombolaza Canut Filamant, Angelo Fulgence Raherinirina, André Totohasina

published 13 Mar 2026

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Respiratory syncytial virus burden among Ugandan adults aged ≥65 years: A 15-year sentinel surveillance study of prevalence, coinfections, and comorbidities (2010–2025)

Haruna Muwonge, Joyce Namulondo, Levicatus Mugenyi, Joweria Nakaseegu, Bridget Nakamoga, Esther Amwine, Roselyne Akugizibwe, Abdul Ssekandi, Mustafa Ssaka, Hassan Kasujja, Godfrey S. Bbosa, David Odongo, Julius Lutwaama, John Kayiwa, Bruce Kirenga, Barnabas Bakamutumaho

published 13 Mar 2026

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The dolutegravir failure cohort: A multi-country longitudinal cohort with a randomised clinical trial of continued dolutegravir versus switch to darunavir in people with viraemia while on dolutegravir in Sub-Saharan Africa (The Ndovu Study) protocol

Loice Achieng Ombajo, Joseph Nkuranga, Jeremy Penner, Emily Wangui Kamau, Nalia Ismael, Patricia Munseri, Irene Ayakaka, Niklaus Labhardt, Dalton Wamalwa, Patricia Ramgi, Raquel Matavele Chissumba, James Wagude, Muhammad Bakari, Victor Omodi, Edwin Otieno, Lisa Abuogi, Rena Patel, Charles Opondo, Daniel Grint, Leonard King’wara, AnneMarie Macharia, Andrew Mulwa, Patrick Amoth, on behalf of the Ndovu study group

published 13 Mar 2026

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TSSpredator-Web: A web-application for transcription start site prediction and exploration

Mathias Witte Paz, Alexander Herbig, Kay Nieselt

published 13 Mar 2026

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Person-centered strategies for integrating TB treatment into community pharmacies for people with TB/HIV in Uganda: A human-centered design methodology study protocol

Jonathan Izudi, Adithya Cattamanchi, Christine Sekaggya-Wiltshire, Rachel King, Noah Kiwanuka, Amanda Sammann

published 12 Mar 2026

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Genetic and pharmacologic inhibition of calcineurin reduces biofilm formation by the pathogenic fungus Trichosporon asahii in an in vivo silkworm infection model

Yasuhiko Matsumoto, Yuta Shimizu, Mei Nakayama, Mai Takizawa, Sanae Kurakado, Takashi Sugita

published 12 Mar 2026

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A comparison of the existing recommendations for human and veterinary clinicians on the management and prevention of the zoonotic aspects of dermatophytosis: A scoping review

Caroline O’Connor, Daisy Hollister, Richard Barlow, Hannah Wainman, Alison Ashmore, Lisa Morrow, Jenny Stavisky, Kathryn Griffiths, Christina Kuhl, Marnie L. Brennan

published 12 Mar 2026

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A cluster of acidic residues in the cytoplasmic domain of SARS-CoV-2 Spike is required for virion-incorporation and infectivity

Charlotte A. Stoneham, Rajendra Singh, Amalia De Leon, Petra Tafelmeyer, Francisco Acosta, Angus Fuori, Michael Anderson, Peter W. Ramirez, Hannah S. Schwartzer-Sperber, Satish Pillai, Mary K. Lewinski, John Guatelli

published 12 Mar 2026

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An Fc-silent OspA monoclonal antibody passively protects mice from tick and intradermal Borrelia burgdorferi challenge

Daniel Palmer, Atieh Shemshadian, Katherine Berman, Ariana Nobles, Graham G. Willsey, Carol Lyn Piazza, Grace Freeman-Gallant, Michael J. Rudolph, Jeff Bourgeois, Linden Hu, David J. Vance, Nicholas J. Mantis

published 12 Mar 2026

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Impact of sugar-based baits on midgut microbiome composition in Aedes mosquitoes: Implications for vector control

Ranjitha Sambanthan, Nur Faeza Abu Kassim, Sara A. Abuelmaali, Wan Maryam Wan Ahmad Kamil, Sumiyyah Sabar, Kamarul Zaman Zarkasi, Wan Rosli Wan Ishak, Cameron E. Webb

published 12 Mar 2026

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In vitro culture of human-infecting Encephalitozoon spp. for genome sequencing with minimal host contaminant

Anne Caroline Mascarenhas dos Santos, Pingdong Liang, Oscar X. Juárez, Jean-François Pombert, Karina Tuz

published 11 Mar 2026

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Bat guano fertilizer as a source of Betacoronavirus: First molecular evidence linking Rhinolophus coelophyllus to viral reservoirs in Thailand

Rattikan Suwannasing, Thachawech Kimprasit

published 11 Mar 2026

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Clinical outcomes and patient-reported measures in HCV care: Insight from a longitudinal prospective study in a large Italian region

Giaele Moretti, Maria Paola Tramonti Fantozzi, Ilaria Corazza, Erica De Vita, Milena Vainieri, Lara Tavoschi, on behalf of OPT-HepaC project team

published 11 Mar 2026

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