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Optimization

Identifying Optimal Models to Represent Biochemical Systems

Mochamad Apri, Maarten de Gee, Simon van Mourik, Jaap Molenaar

Graph Independent Component Analysis Reveals Repertoires of Intrinsic Network Components in the Human Brain

Bumhee Park, Dae-Shik Kim, Hae-Jeong Park

Boosting the Concordance Index for Survival Data – A Unified Framework To Derive and Evaluate Biomarker Combinations

Andreas Mayr, Matthias Schmid

A Hybrid Analytical/Numerical Model for the Characterization of Preferential Flow Path with Non-Darcy Flow

Sen Wang, Qihong Feng, Xiaodong Han

Inference of Vohradský's Models of Genetic Networks by Solving Two-Dimensional Function Optimization Problems

Shuhei Kimura, Masanao Sato, Mariko Okada-Hatakeyama

Evaluation of New Zealand’s High-Seas Bottom Trawl Closures Using Predictive Habitat Models and Quantitative Risk Assessment

Andrew J. Penney, John M. Guinotte

Multiview Locally Linear Embedding for Effective Medical Image Retrieval

Hualei Shen, Dacheng Tao, Dianfu Ma

A Prognostic Gene Signature for Metastasis-Free Survival of Triple Negative Breast Cancer Patients

UnJin Lee, Casey Frankenberger, [ ... ], Marsha Rich Rosner

ReacKnock: Identifying Reaction Deletion Strategies for Microbial Strain Optimization Based on Genome-Scale Metabolic Network

Zixiang Xu, Ping Zheng, Jibin Sun, Yanhe Ma

A Model of an Integrated Immune System Pathway in Homo sapiens and Its Interaction with Superantigen Producing Expression Regulatory Pathway in Staphylococcus aureus: Comparing Behavior of Pathogen Perturbed and Unperturbed Pathway

Namrata Tomar, Rajat K. De

Simulating the Dynamics of Scale-Free Networks via Optimization

Tiago Alves Schieber, Martín Gómez Ravetti

PD5: A General Purpose Library for Primer Design Software

Michael C. Riley, Wayne Aubrey, Michael Young, Amanda Clare

What Can We Learn from Global Sensitivity Analysis of Biochemical Systems?

Edward Kent, Stefan Neumann, Ursula Kummer, Pedro Mendes

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