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Open source software

PD5: A General Purpose Library for Primer Design Software

Michael C. Riley, Wayne Aubrey, Michael Young, Amanda Clare

published 21 Nov 2013

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Analysis of Lipid Experiments (ALEX): A Software Framework for Analysis of High-Resolution Shotgun Lipidomics Data

Peter Husen, Kirill Tarasov, Maciej Katafiasz, Elena Sokol, Johannes Vogt, Jan Baumgart, Robert Nitsch, Kim Ekroos, Christer S. Ejsing

published 07 Nov 2013

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AAscan, PCRdesign and MutantChecker: A Suite of Programs for Primer Design and Sequence Analysis for High-Throughput Scanning Mutagenesis

Dawei Sun, Martin K. Ostermaier, Franziska M. Heydenreich, Daniel Mayer, Rolf Jaussi, Joerg Standfuss, Dmitry B. Veprintsev

published 30 Oct 2013

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Comprehensive Quantitative Analysis on Privacy Leak Behavior

Lejun Fan, Yuanzhuo Wang, Xiaolong Jin, Jingyuan Li, Xueqi Cheng, Shuyuan Jin

published 16 Sep 2013

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A User-Friendly Model for Spray Drying to Aid Pharmaceutical Product Development

Niels Grasmeijer, Hans de Waard, Wouter L. J. Hinrichs, Henderik W. Frijlink

published 09 Sep 2013

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TLM-Quant: An Open-Source Pipeline for Visualization and Quantification of Gene Expression Heterogeneity in Growing Microbial Cells

Sjouke Piersma, Emma L. Denham, Samuel Drulhe, Rudi H. J. Tonk, Benno Schwikowski, Jan Maarten van Dijl

published 17 Jul 2013

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The PyRosetta Toolkit: A Graphical User Interface for the Rosetta Software Suite

Jared Adolf-Bryfogle, Roland L. Dunbrack Jr.

published 09 Jul 2013

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Why Even More Clinical Research Studies May Be False: Effect of Asymmetrical Handling of Clinically Unexpected Values

Matthew James Shun-Shin, Darrel P. Francis

published 25 Jun 2013

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Genomer — A Swiss Army Knife for Genome Scaffolding

Michael D. Barton, Hazel A. Barton

published 24 Jun 2013

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ScriptingRT: A Software Library for Collecting Response Latencies in Online Studies of Cognition

Thomas W. Schubert, Carla Murteira, Elizabeth C. Collins, Diniz Lopes

published 21 Jun 2013

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The SPECIES and ORGANISMS Resources for Fast and Accurate Identification of Taxonomic Names in Text

Evangelos Pafilis, Sune P. Frankild, Lucia Fanini, Sarah Faulwetter, Christina Pavloudi, Aikaterini Vasileiadou, Christos Arvanitidis, Lars Juhl Jensen

published 18 Jun 2013

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A Unified Proteochemometric Model for Prediction of Inhibition of Cytochrome P450 Isoforms

Maris Lapins, Apilak Worachartcheewan, Ola Spjuth, Valentin Georgiev, Virapong Prachayasittikul, Chanin Nantasenamat, Jarl E. S. Wikberg

published 17 Jun 2013

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An Automated Image Analysis System to Measure and Count Organisms in Laboratory Microcosms

François Mallard, Vincent Le Bourlot, Thomas Tully

published 29 May 2013

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