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Open source software

GABenchToB: A Genome Assembly Benchmark Tuned on Bacteria and Benchtop Sequencers

Sebastian Jünemann, Karola Prior, Andreas Albersmeier, Stefan Albaum, Jörn Kalinowski, Alexander Goesmann, Jens Stoye, Dag Harmsen

published 08 Sep 2014

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Cheburator Software for Automatically Calculating Drug Inhibitory Concentrations from In Vitro Screening Assays

Dmitry Nevozhay

published 03 Sep 2014

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esyN: Network Building, Sharing and Publishing

Daniel M. Bean, Joshua Heimbach, Lorenzo Ficorella, Gos Micklem, Stephen G. Oliver, Giorgio Favrin

published 02 Sep 2014

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A Service Brokering and Recommendation Mechanism for Better Selecting Cloud Services

Zhipeng Gui, Chaowei Yang, Jizhe Xia, Qunying Huang, Kai Liu, Zhenlong Li, Manzhu Yu, Min Sun, Nanyin Zhou, Baoxuan Jin

published 29 Aug 2014

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Low-Cost Motility Tracking System (LOCOMOTIS) for Time-Lapse Microscopy Applications and Cell Visualisation

Adam E. Lynch, Junian Triajianto, Edwin Routledge

published 14 Aug 2014

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How Much Is the Whole Really More than the Sum of Its Parts? 1 ⊞ 1 = 2.5: Superlinear Productivity in Collective Group Actions

Didier Sornette, Thomas Maillart, Giacomo Ghezzi

published 01 Aug 2014

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fcGENE: A Versatile Tool for Processing and Transforming SNP Datasets

Nab Raj Roshyara, Markus Scholz

published 22 Jul 2014

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A Digital Network Approach to Infer Sex Behavior in Emerging HIV Epidemics

Abhinav Kapur, John A. Schneider, Daniel Heard, Sayan Mukherjee, Phil Schumm, Ganesh Oruganti, Edward O. Laumann

published 03 Jul 2014

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QSAR-Based Models for Designing Quinazoline/Imidazothiazoles/Pyrazolopyrimidines Based Inhibitors against Wild and Mutant EGFR

Jagat Singh Chauhan, Sandeep Kumar Dhanda, Deepak Singla, Open Source Drug Discovery Consortium , Subhash M. Agarwal, Gajendra P. S. Raghava

published 03 Jul 2014

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CloudDOE: A User-Friendly Tool for Deploying Hadoop Clouds and Analyzing High-Throughput Sequencing Data with MapReduce

Wei-Chun Chung, Chien-Chih Chen, Jan-Ming Ho, Chung-Yen Lin, Wen-Lian Hsu, Yu-Chun Wang, D. T. Lee, Feipei Lai, Chih-Wei Huang, Yu-Jung Chang

published 04 Jun 2014

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IHC Profiler: An Open Source Plugin for the Quantitative Evaluation and Automated Scoring of Immunohistochemistry Images of Human Tissue Samples

Frency Varghese, Amirali B. Bukhari, Renu Malhotra, Abhijit De

published 06 May 2014

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An Open Source 3-D Printed Modular Micro-Drive System for Acute Neurophysiology

Shaun R. Patel, Kaushik Ghose, Emad N. Eskandar

published 15 Apr 2014

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ss3sim: An R Package for Fisheries Stock Assessment Simulation with Stock Synthesis

Sean C. Anderson, Cole C. Monnahan, Kelli F. Johnson, Kotaro Ono, Juan L. Valero

published 03 Apr 2014

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