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Open source software

IQM: An Extensible and Portable Open Source Application for Image and Signal Analysis in Java

Philipp Kainz, Michael Mayrhofer-Reinhartshuber, Helmut Ahammer

published 22 Jan 2015

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FindFoci: A Focus Detection Algorithm with Automated Parameter Training That Closely Matches Human Assignments, Reduces Human Inconsistencies and Increases Speed of Analysis

Alex D. Herbert, Antony M. Carr, Eva Hoffmann

published 05 Dec 2014

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The Connectome Visualization Utility: Software for Visualization of Human Brain Networks

Roan A. LaPlante, Linda Douw, Wei Tang, Steven M. Stufflebeam

published 01 Dec 2014

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Implementing Spatial Segregation Measures in R

Seong-Yun Hong, David O'Sullivan, Yukio Sadahiro

published 21 Nov 2014

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CollaborationViz: Interactive Visual Exploration of Biomedical Research Collaboration Networks

Jiang Bian, Mengjun Xie, Teresa J. Hudson, Hari Eswaran, Mathias Brochhausen, Josh Hanna, William R. Hogan

published 18 Nov 2014

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A Bridge Role Metric Model for Nodes in Software Networks

Bo Li, Yanli Feng, Shiyu Ge, Dashe Li

published 03 Nov 2014

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Posterior Cerebral Artery Angle and the Rupture of Basilar Tip Aneurysms

Allen L. Ho, Amr Mouminah, Rose Du

published 29 Oct 2014

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OxMaR: Open Source Free Software for Online Minimization and Randomization for Clinical Trials

Christopher A. O’Callaghan

published 29 Oct 2014

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COPASutils: An R Package for Reading, Processing, and Visualizing Data from COPAS Large-Particle Flow Cytometers

Tyler C. Shimko, Erik C. Andersen

published 20 Oct 2014

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Open-Source Syringe Pump Library

Bas Wijnen, Emily J. Hunt, Gerald C. Anzalone, Joshua M. Pearce

published 17 Sep 2014

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GABenchToB: A Genome Assembly Benchmark Tuned on Bacteria and Benchtop Sequencers

Sebastian Jünemann, Karola Prior, Andreas Albersmeier, Stefan Albaum, Jörn Kalinowski, Alexander Goesmann, Jens Stoye, Dag Harmsen

published 08 Sep 2014

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Cheburator Software for Automatically Calculating Drug Inhibitory Concentrations from In Vitro Screening Assays

Dmitry Nevozhay

published 03 Sep 2014

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esyN: Network Building, Sharing and Publishing

Daniel M. Bean, Joshua Heimbach, Lorenzo Ficorella, Gos Micklem, Stephen G. Oliver, Giorgio Favrin

published 02 Sep 2014

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