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Open source software

Gesture-Controlled Image Management for Operating Room: A Randomized Crossover Study to Compare Interaction Using Gestures, Mouse, and Third Person Relaying

Rolf Wipfli, Victor Dubois-Ferrière, Sylvain Budry, Pierre Hoffmeyer, Christian Lovis

published 15 Apr 2016

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SWATH2stats: An R/Bioconductor Package to Process and Convert Quantitative SWATH-MS Proteomics Data for Downstream Analysis Tools

Peter Blattmann, Moritz Heusel, Ruedi Aebersold

published 07 Apr 2016

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GUIdock: Using Docker Containers with a Common Graphics User Interface to Address the Reproducibility of Research

Ling-Hong Hung, Daniel Kristiyanto, Sung Bong Lee, Ka Yee Yeung

published 05 Apr 2016

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SAMA: A Method for 3D Morphological Analysis

Tessie Paulose, Maël Montévil, Lucia Speroni, Florent Cerruti, Carlos Sonnenschein, Ana M. Soto

published 01 Apr 2016

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C3-PRO: Connecting ResearchKit to the Health System Using i2b2 and FHIR

Pascal B. Pfiffner, Isaac Pinyol, Marc D. Natter, Kenneth D. Mandl

published 31 Mar 2016

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Design and Implementation of an Interactive Web-Based Near Real-Time Forest Monitoring System

Arun Kumar Pratihast, Ben DeVries, Valerio Avitabile, Sytze de Bruin, Martin Herold, Aldo Bergsma

published 31 Mar 2016

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FoodChain-Lab: A Trace-Back and Trace-Forward Tool Developed and Applied during Food-Borne Disease Outbreak Investigations in Germany and Europe

Armin A. Weiser, Christian Thöns, Matthias Filter, Alexander Falenski, Bernd Appel, Annemarie Käsbohrer

published 17 Mar 2016

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PopulationProfiler: A Tool for Population Analysis and Visualization of Image-Based Cell Screening Data

Damian J. Matuszewski, Carolina Wählby, Jordi Carreras Puigvert, Ida-Maria Sintorn

published 17 Mar 2016

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Interactive Data Visualization for HIV Cohorts: Leveraging Data Exchange Standards to Share and Reuse Research Tools

Meridith Blevins, Firas H. Wehbe, Peter F. Rebeiro, Yanink Caro-Vega, Catherine C. McGowan, Bryan E. Shepherd, The Caribbean, Central, South America Network for HIV Epidemiology (CCASAnet)

published 10 Mar 2016

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The Implicitome: A Resource for Rationalizing Gene-Disease Associations

Kristina M. Hettne, Mark Thompson, Herman H. H. B. M. van Haagen, Eelke van der Horst, Rajaram Kaliyaperumal, Eleni Mina, Zuotian Tatum, Jeroen F. J. Laros, Erik M. van Mulligen, Martijn Schuemie, Emmelien Aten, Tong Shu Li, Richard Bruskiewich, Benjamin M. Good, Andrew I. Su, Jan A. Kors, Johan den Dunnen, Gert-Jan B. van Ommen, Marco Roos, Peter A.C. ‘t Hoen, Barend Mons, Erik A. Schultes

published 26 Feb 2016

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A Method and On-Line Tool for Maximum Likelihood Calibration of Immunoblots and Other Measurements That Are Quantified in Batches

Steven S. Andrews, Suzannah Rutherford

published 23 Feb 2016

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End to End Digitisation and Analysis of Three-Dimensional Coral Models, from Communities to Corallites

Luis Gutierrez-Heredia, Francesca Benzoni, Emma Murphy, Emmanuel G. Reynaud

published 22 Feb 2016

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A Robust and Accurate Two-Step Auto-Labeling Conditional Iterative Closest Points (TACICP) Algorithm for Three-Dimensional Multi-Modal Carotid Image Registration

Hengkai Guo, Guijin Wang, Lingyun Huang, Yuxin Hu, Chun Yuan, Rui Li, Xihai Zhao

published 16 Feb 2016

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