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Open source software

cSPider – Evaluation of a Free and Open-Source Automated Tool to Analyze Corticomotor Silent Period

Skadi Wilke, Dennis Groenveld, Ulrike Grittner, Jonathan List, Agnes Flöel

published 01 Jun 2016

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The Challenges of Implementing Next Generation Sequencing Across a Large Healthcare System, and the Molecular Epidemiology and Antibiotic Susceptibilities of Carbapenemase-Producing Bacteria in the Healthcare System of the U.S. Department of Defense

Emil Lesho, Robert Clifford, Fatma Onmus-Leone, Lakshmi Appalla, Erik Snesrud, Yoon Kwak, Ana Ong, Rosslyn Maybank, Paige Waterman, Patricia Rohrbeck, Michael Julius, Amanda Roth, Joshua Martinez, Lindsey Nielsen, Eric Steele, Patrick McGann, Mary Hinkle

published 19 May 2016

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Converging Work-Talk Patterns in Online Task-Oriented Communities

Qi Xuan, Premkumar Devanbu, Vladimir Filkov

published 03 May 2016

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Inequalities in Open Source Software Development: Analysis of Contributor’s Commits in Apache Software Foundation Projects

Tadeusz Chełkowski, Peter Gloor, Dariusz Jemielniak

published 20 Apr 2016

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Gesture-Controlled Image Management for Operating Room: A Randomized Crossover Study to Compare Interaction Using Gestures, Mouse, and Third Person Relaying

Rolf Wipfli, Victor Dubois-Ferrière, Sylvain Budry, Pierre Hoffmeyer, Christian Lovis

published 15 Apr 2016

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SWATH2stats: An R/Bioconductor Package to Process and Convert Quantitative SWATH-MS Proteomics Data for Downstream Analysis Tools

Peter Blattmann, Moritz Heusel, Ruedi Aebersold

published 07 Apr 2016

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GUIdock: Using Docker Containers with a Common Graphics User Interface to Address the Reproducibility of Research

Ling-Hong Hung, Daniel Kristiyanto, Sung Bong Lee, Ka Yee Yeung

published 05 Apr 2016

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SAMA: A Method for 3D Morphological Analysis

Tessie Paulose, Maël Montévil, Lucia Speroni, Florent Cerruti, Carlos Sonnenschein, Ana M. Soto

published 01 Apr 2016

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C3-PRO: Connecting ResearchKit to the Health System Using i2b2 and FHIR

Pascal B. Pfiffner, Isaac Pinyol, Marc D. Natter, Kenneth D. Mandl

published 31 Mar 2016

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Design and Implementation of an Interactive Web-Based Near Real-Time Forest Monitoring System

Arun Kumar Pratihast, Ben DeVries, Valerio Avitabile, Sytze de Bruin, Martin Herold, Aldo Bergsma

published 31 Mar 2016

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FoodChain-Lab: A Trace-Back and Trace-Forward Tool Developed and Applied during Food-Borne Disease Outbreak Investigations in Germany and Europe

Armin A. Weiser, Christian Thöns, Matthias Filter, Alexander Falenski, Bernd Appel, Annemarie Käsbohrer

published 17 Mar 2016

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PopulationProfiler: A Tool for Population Analysis and Visualization of Image-Based Cell Screening Data

Damian J. Matuszewski, Carolina Wählby, Jordi Carreras Puigvert, Ida-Maria Sintorn

published 17 Mar 2016

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Interactive Data Visualization for HIV Cohorts: Leveraging Data Exchange Standards to Share and Reuse Research Tools

Meridith Blevins, Firas H. Wehbe, Peter F. Rebeiro, Yanink Caro-Vega, Catherine C. McGowan, Bryan E. Shepherd, The Caribbean, Central, South America Network for HIV Epidemiology (CCASAnet)

published 10 Mar 2016

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