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Open source software

FUCCItrack: An all-in-one software for single cell tracking and cell cycle analysis

Hubert M. Taïeb, Luca Bertinetti, Tom Robinson, Amaia Cipitria

published 06 Jul 2022

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Micro-sized open-source and low-cost GPS loggers below 1 g minimise the impact on animals while collecting thousands of fixes

Timm A. Wild, Jens C. Koblitz, Dina K. N. Dechmann, Christian Dietz, Mirko Meboldt, Martin Wikelski

published 29 Jun 2022

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CI-SpliceAI—Improving machine learning predictions of disease causing splicing variants using curated alternative splice sites

Yaron Strauch, Jenny Lord, Mahesan Niranjan, Diana Baralle

published 03 Jun 2022

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RadStat: An open-source statistical analysis tool for counts obtained by a GM counter

Mehrdad Shahmohammadi Beni, Hiroshi Watabe, Wing Sum Kwan, M. Rafiqul Islam, Kwan Ngok Yu

published 31 May 2022

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Cardio PyMEA: A user-friendly, open-source Python application for cardiomyocyte microelectrode array analysis

Christopher S. Dunham, Madelynn E. Mackenzie, Haruko Nakano, Alexis R. Kim, Atsushi Nakano, Adam Z. Stieg, James K. Gimzewski

published 26 May 2022

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Addressing the need for interactive, efficient, and reproducible data processing in ecology with the datacleanr R package

Alexander G. Hurley, Richard L. Peters, Christoforos Pappas, David N. Steger, Ingo Heinrich

published 12 May 2022

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PVP1—The People’s Ventilator Project: A fully open, low-cost, pressure-controlled ventilator research platform compatible with adult and pediatric uses

Julienne LaChance, Manuel Schottdorf, Tom J. Zajdel, Jonny L. Saunders, Sophie Dvali, Chase Marshall, Lorenzo Seirup, Ibrahim Sammour, Robert L. Chatburn, Daniel A. Notterman, Daniel J. Cohen

published 11 May 2022

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Software reliability model of open source software based on the decreasing trend of fault introduction

Jinyong Wang, Ce Zhang, Jianying Yang

published 02 May 2022

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Practical and technical aspects for the 3D scanning of lithic artefacts using micro-computed tomography techniques and laser light scanners for subsequent geometric morphometric analysis. Introducing the StyroStone protocol

Dominik Göldner, Fotios Alexandros Karakostis, Armando Falcucci

published 21 Apr 2022

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Do-It-Yourself digital archaeology: Introduction and practical applications of photography and photogrammetry for the 2D and 3D representation of small objects and artefacts

Jacopo Niccolò Cerasoni, Felipe do Nascimento Rodrigues, Yu Tang, Emily Yuko Hallett

published 15 Apr 2022

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Open-source low-cost cardiac optical mapping system

Dmitry Rybashlykov, Jaclyn Brennan, Zexu Lin, Igor R. Efimov, Roman Syunyaev

published 31 Mar 2022

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Coverage-guided differential testing of TLS implementations based on syntax mutation

Yan Pan, Wei Lin, Yubo He, Yuefei Zhu

published 24 Jan 2022

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Estimating body segment parameters from three-dimensional human body scans

Pawel Kudzia, Erika Jackson, Genevieve Dumas

published 05 Jan 2022

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