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Open science

Toward Reproducible Computational Research: An Empirical Analysis of Data and Code Policy Adoption by Journals

Victoria Stodden, Peixuan Guo, Zhaokun Ma

published 21 Jun 2013

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The SPECIES and ORGANISMS Resources for Fast and Accurate Identification of Taxonomic Names in Text

Evangelos Pafilis, Sune P. Frankild, Lucia Fanini, Sarah Faulwetter, Christina Pavloudi, Aikaterini Vasileiadou, Christos Arvanitidis, Lars Juhl Jensen

published 18 Jun 2013

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A Unified Proteochemometric Model for Prediction of Inhibition of Cytochrome P450 Isoforms

Maris Lapins, Apilak Worachartcheewan, Ola Spjuth, Valentin Georgiev, Virapong Prachayasittikul, Chanin Nantasenamat, Jarl E. S. Wikberg

published 17 Jun 2013

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An Automated Image Analysis System to Measure and Count Organisms in Laboratory Microcosms

François Mallard, Vincent Le Bourlot, Thomas Tully

published 29 May 2013

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Dispec: A Novel Peptide Scoring Algorithm Based on Peptide Matching Discriminability

Chuan-Le Xiao, Xiao-Zhou Chen, Yang-Li Du, Zhe-Fu Li, Li Wei, Gong Zhang, Qing-Yu He

published 13 May 2013

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Remarkable Growth of Open Access in the Biomedical Field: Analysis of PubMed Articles from 2006 to 2010

Keiko Kurata, Tomoko Morioka, Keiko Yokoi, Mamiko Matsubayashi

published 01 May 2013

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IMACULAT — An Open Access Package for the Quantitative Analysis of Chromosome Localization in the Nucleus

Ishita Mehta, Sandeep Chakraborty, Basuthkar J. Rao

published 08 Apr 2013

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Assessment of Shape Changes of Mistletoe Berries: A New Software Approach to Automatize the Parameterization of Path Curve Shaped Contours

Renatus Derbidge, Linus Feiten, Oliver Conradt, Peter Heusser, Stephan Baumgartner

published 02 Apr 2013

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Open-Source 3D-Printable Optics Equipment

Chenlong Zhang, Nicholas C. Anzalone, Rodrigo P. Faria, Joshua M. Pearce

published 27 Mar 2013

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SNPflow: A Lightweight Application for the Processing, Storing and Automatic Quality Checking of Genotyping Assays

Hansi Weissensteiner, Margot Haun, Sebastian Schönherr, Mathias Neuner, Lukas Forer, Günther Specht, Anita Kloss-Brandstätter, Florian Kronenberg, Stefan Coassin

published 19 Mar 2013

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SHRINE: Enabling Nationally Scalable Multi-Site Disease Studies

Andrew J. McMurry, Shawn N. Murphy, Douglas MacFadden, Griffin Weber, William W. Simons, John Orechia, Jonathan Bickel, Nich Wattanasin, Clint Gilbert, Philip Trevvett, Susanne Churchill, Isaac S. Kohane

published 07 Mar 2013

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Community Intelligence in Knowledge Curation: An Application to Managing Scientific Nomenclature

Lin Dai, Chao Xu, Ming Tian, Jian Sang, Dong Zou, Ang Li, Guocheng Liu, Fei Chen, Jiayan Wu, Jingfa Xiao, Xumin Wang, Jun Yu, Zhang Zhang

published 25 Feb 2013

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WormSizer: High-throughput Analysis of Nematode Size and Shape

Brad T. Moore, James M. Jordan, L. Ryan Baugh

published 22 Feb 2013

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