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Open science

IHC Profiler: An Open Source Plugin for the Quantitative Evaluation and Automated Scoring of Immunohistochemistry Images of Human Tissue Samples

Frency Varghese, Amirali B. Bukhari, Renu Malhotra, Abhijit De

published 06 May 2014

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An Open Source 3-D Printed Modular Micro-Drive System for Acute Neurophysiology

Shaun R. Patel, Kaushik Ghose, Emad N. Eskandar

published 15 Apr 2014

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ss3sim: An R Package for Fisheries Stock Assessment Simulation with Stock Synthesis

Sean C. Anderson, Cole C. Monnahan, Kelli F. Johnson, Kotaro Ono, Juan L. Valero

published 03 Apr 2014

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Open Source Software to Control Bioflo Bioreactors

David A. Burdge, Igor G. L. Libourel

published 25 Mar 2014

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rAvis: An R-Package for Downloading Information Stored in Proyecto AVIS, a Citizen Science Bird Project

Sara Varela, Javier González-Hernández, Eduardo Casabella, Rafael Barrientos

published 13 Mar 2014

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Integrated Data Management for Clinical Studies: Automatic Transformation of Data Models with Semantic Annotations for Principal Investigators, Data Managers and Statisticians

Martin Dugas, Susanne Dugas-Breit

published 28 Feb 2014

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STORMSeq: An Open-Source, User-Friendly Pipeline for Processing Personal Genomics Data in the Cloud

Konrad J. Karczewski, Guy Haskin Fernald, Alicia R. Martin, Michael Snyder, Nicholas P. Tatonetti, Joel T. Dudley

published 15 Jan 2014

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Labour-Efficient In Vitro Lymphocyte Population Tracking and Fate Prediction Using Automation and Manual Review

Rajib Chakravorty, David Rawlinson, Alan Zhang, John Markham, Mark R. Dowling, Cameron Wellard, Jie H. S. Zhou, Philip D. Hodgkin

published 03 Jan 2014

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Effectiveness of Link Prediction for Face-to-Face Behavioral Networks

Sho Tsugawa, Hiroyuki Ohsaki

published 10 Dec 2013

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Quantifying Reproducibility in Computational Biology: The Case of the Tuberculosis Drugome

Daniel Garijo, Sarah Kinnings, Li Xie, Lei Xie, Yinliang Zhang, Philip E. Bourne, Yolanda Gil

published 27 Nov 2013

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PD5: A General Purpose Library for Primer Design Software

Michael C. Riley, Wayne Aubrey, Michael Young, Amanda Clare

published 21 Nov 2013

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Analysis of Lipid Experiments (ALEX): A Software Framework for Analysis of High-Resolution Shotgun Lipidomics Data

Peter Husen, Kirill Tarasov, Maciej Katafiasz, Elena Sokol, Johannes Vogt, Jan Baumgart, Robert Nitsch, Kim Ekroos, Christer S. Ejsing

published 07 Nov 2013

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AAscan, PCRdesign and MutantChecker: A Suite of Programs for Primer Design and Sequence Analysis for High-Throughput Scanning Mutagenesis

Dawei Sun, Martin K. Ostermaier, Franziska M. Heydenreich, Daniel Mayer, Rolf Jaussi, Joerg Standfuss, Dmitry B. Veprintsev

published 30 Oct 2013

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