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Open science

Quantifying Reproducibility in Computational Biology: The Case of the Tuberculosis Drugome

Daniel Garijo, Sarah Kinnings, Li Xie, Lei Xie, Yinliang Zhang, Philip E. Bourne, Yolanda Gil

published 27 Nov 2013

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PD5: A General Purpose Library for Primer Design Software

Michael C. Riley, Wayne Aubrey, Michael Young, Amanda Clare

published 21 Nov 2013

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Analysis of Lipid Experiments (ALEX): A Software Framework for Analysis of High-Resolution Shotgun Lipidomics Data

Peter Husen, Kirill Tarasov, Maciej Katafiasz, Elena Sokol, Johannes Vogt, Jan Baumgart, Robert Nitsch, Kim Ekroos, Christer S. Ejsing

published 07 Nov 2013

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AAscan, PCRdesign and MutantChecker: A Suite of Programs for Primer Design and Sequence Analysis for High-Throughput Scanning Mutagenesis

Dawei Sun, Martin K. Ostermaier, Franziska M. Heydenreich, Daniel Mayer, Rolf Jaussi, Joerg Standfuss, Dmitry B. Veprintsev

published 30 Oct 2013

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Comprehensive Quantitative Analysis on Privacy Leak Behavior

Lejun Fan, Yuanzhuo Wang, Xiaolong Jin, Jingyuan Li, Xueqi Cheng, Shuyuan Jin

published 16 Sep 2013

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A User-Friendly Model for Spray Drying to Aid Pharmaceutical Product Development

Niels Grasmeijer, Hans de Waard, Wouter L. J. Hinrichs, Henderik W. Frijlink

published 09 Sep 2013

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Glocal Clinical Registries: Pacemaker Registry Design and Implementation for Global and Local Integration – Methodology and Case Study

Kátia Regina da Silva, Roberto Costa, Elizabeth Sartori Crevelari, Marianna Sobral Lacerda, Caio Marcos de Moraes Albertini, Martino Martinelli Filho, José Eduardo Santana, João Ricardo Nickenig Vissoci, Ricardo Pietrobon, Jacson V. Barros

published 25 Jul 2013

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Evidence That Personal Genome Testing Enhances Student Learning in a Course on Genomics and Personalized Medicine

Keyan Salari, Konrad J. Karczewski, Louanne Hudgins, Kelly E. Ormond

published 23 Jul 2013

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TLM-Quant: An Open-Source Pipeline for Visualization and Quantification of Gene Expression Heterogeneity in Growing Microbial Cells

Sjouke Piersma, Emma L. Denham, Samuel Drulhe, Rudi H. J. Tonk, Benno Schwikowski, Jan Maarten van Dijl

published 17 Jul 2013

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The PyRosetta Toolkit: A Graphical User Interface for the Rosetta Software Suite

Jared Adolf-Bryfogle, Roland L. Dunbrack Jr.

published 09 Jul 2013

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Why Even More Clinical Research Studies May Be False: Effect of Asymmetrical Handling of Clinically Unexpected Values

Matthew James Shun-Shin, Darrel P. Francis

published 25 Jun 2013

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Genomer — A Swiss Army Knife for Genome Scaffolding

Michael D. Barton, Hazel A. Barton

published 24 Jun 2013

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ScriptingRT: A Software Library for Collecting Response Latencies in Online Studies of Cognition

Thomas W. Schubert, Carla Murteira, Elizabeth C. Collins, Diniz Lopes

published 21 Jun 2013

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