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Open science

CloudDOE: A User-Friendly Tool for Deploying Hadoop Clouds and Analyzing High-Throughput Sequencing Data with MapReduce

Wei-Chun Chung, Chien-Chih Chen, [ ... ], Yu-Jung Chang

Sharing Individual Participant Data from Clinical Trials: An Opinion Survey Regarding the Establishment of a Central Repository

Catrin Tudur Smith, Kerry Dwan, [ ... ], Paula R. Williamson

IHC Profiler: An Open Source Plugin for the Quantitative Evaluation and Automated Scoring of Immunohistochemistry Images of Human Tissue Samples

Frency Varghese, Amirali B. Bukhari, Renu Malhotra, Abhijit De

An Open Source 3-D Printed Modular Micro-Drive System for Acute Neurophysiology

Shaun R. Patel, Kaushik Ghose, Emad N. Eskandar

ss3sim: An R Package for Fisheries Stock Assessment Simulation with Stock Synthesis

Sean C. Anderson, Cole C. Monnahan, [ ... ], Juan L. Valero

Open Source Software to Control Bioflo Bioreactors

David A. Burdge, Igor G. L. Libourel

rAvis: An R-Package for Downloading Information Stored in Proyecto AVIS, a Citizen Science Bird Project

Sara Varela, Javier González-Hernández, Eduardo Casabella, Rafael Barrientos

Integrated Data Management for Clinical Studies: Automatic Transformation of Data Models with Semantic Annotations for Principal Investigators, Data Managers and Statisticians

Martin Dugas, Susanne Dugas-Breit

STORMSeq: An Open-Source, User-Friendly Pipeline for Processing Personal Genomics Data in the Cloud

Konrad J. Karczewski, Guy Haskin Fernald, [ ... ], Joel T. Dudley

Labour-Efficient In Vitro Lymphocyte Population Tracking and Fate Prediction Using Automation and Manual Review

Rajib Chakravorty, David Rawlinson, [ ... ], Philip D. Hodgkin

Effectiveness of Link Prediction for Face-to-Face Behavioral Networks

Sho Tsugawa, Hiroyuki Ohsaki

Quantifying Reproducibility in Computational Biology: The Case of the Tuberculosis Drugome

Daniel Garijo, Sarah Kinnings, [ ... ], Yolanda Gil

PD5: A General Purpose Library for Primer Design Software

Michael C. Riley, Wayne Aubrey, Michael Young, Amanda Clare

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