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Ontologies

Demographic and socioeconomic determinants of access to care: A subgroup disparity analysis using new equity-focused measurements

Miao Qi, Henrique Santos, Paulo Pinheiro, Deborah L. McGuinness, Kristin P. Bennett

published 16 Nov 2023

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A health terminological system for inherited retinal diseases: Content coverage evaluation and a proposed classification

Hamideh Sabbaghi, Sina Madani, Hamid Ahmadieh, Narsis Daftarian, Fatemeh Suri, Farid Khorrami, Proshat Saviz, Mohammad Hasan Shahriari, Tahmineh Motevasseli, Sahba Fekri, Ramin Nourinia, Siamak Moradian, Abbas Sheikhtaheri

published 04 Aug 2023

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OntoTrek: 3D visualization of application ontology class hierarchies

Damion Dooley, Matthew H. Nguyen, William W. L. Hsiao

published 02 Jun 2023

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Phenopacket-tools: Building and validating GA4GH Phenopackets

Daniel Danis, Julius O. B. Jacobsen, Alex H. Wagner, Tudor Groza, Martha A. Beckwith, Lauren Rekerle, Leigh C. Carmody, Justin Reese, Harshad Hegde, Markus S. Ladewig, Berthold Seitz, Monica Munoz-Torres, Nomi L. Harris, Jordi Rambla, Michael Baudis, Christopher J. Mungall, Melissa A. Haendel, Peter N. Robinson

published 17 May 2023

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Computing mathematical functions with chemical reactions via stochastic logic

Arnav Solanki, Tonglin Chen, Marc Riedel

published 08 May 2023

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CIRO: COVID-19 infection risk ontology

Shusaku Egami, Yasunori Yamamoto, Ikki Ohmukai, Takashi Okumura

published 30 Mar 2023

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NorMASS: A normative MAS-based modeling approach for simulating incentive mechanisms of Q&A communities

Yi Yang, Xinjun Mao, Shuo Yang, Menghan Wu

published 09 Feb 2023

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Omnicrobe, an open-access database of microbial habitats and phenotypes using a comprehensive text mining and data fusion approach

Sandra Dérozier, Robert Bossy, Louise Deléger, Mouhamadou Ba, Estelle Chaix, Olivier Harlé, Valentin Loux, Hélène Falentin, Claire Nédellec

published 20 Jan 2023

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Mapping of UK Biobank clinical codes: Challenges and possible solutions

Oleg Stroganov, Alena Fedarovich, Emily Wong, Yulia Skovpen, Elena Pakhomova, Ivan Grishagin, Dzmitry Fedarovich, Tania Khasanova, David Merberg, Sándor Szalma, Julie Bryant

published 16 Dec 2022

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CureSCi Metadata Catalog–Making sickle cell studies findable

Huaqin Pan, Cataia Ives, Meisha Mandal, Ying Qin, Tabitha Hendershot, Jen Popovic, Donald Brambilla, Jeran Stratford, Marsha Treadwell, Xin Wu, Barbara Kroner

published 12 Dec 2022

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A reproducible experimental survey on biomedical sentence similarity: A string-based method sets the state of the art

Alicia Lara-Clares, Juan J. Lastra-Díaz, Ana Garcia-Serrano

published 21 Nov 2022

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Human knowledge models: Learning applied knowledge from the data

Egor Dudyrev, Ilia Semenkov, Sergei O. Kuznetsov, Gleb Gusev, Andrew Sharp, Oleg S. Pianykh

published 20 Oct 2022

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Research data management in agricultural sciences in Germany: We are not yet where we want to be

Matthias Senft, Ulrike Stahl, Nikolai Svoboda

published 30 Sep 2022

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