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Ontologies

Partitioning of Minimotifs Based on Function with Improved Prediction Accuracy

Sanguthevar Rajasekaran, Tian Mi, Jerlin Camilus Merlin, Aaron Oommen, Patrick Gradie, Martin R. Schiller

published 19 Aug 2010

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Statistical Tests for Associations between Two Directed Acyclic Graphs

Robert Hoehndorf, Axel-Cyrille Ngonga Ngomo, Michael Dannemann, Janet Kelso

published 16 Jun 2010

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Evolutionary Characters, Phenotypes and Ontologies: Curating Data from the Systematic Biology Literature

Wasila M. Dahdul, James P. Balhoff, Jeffrey Engeman, Terry Grande, Eric J. Hilton, Cartik Kothari, Hilmar Lapp, John G. Lundberg, Peter E. Midford, Todd J. Vision, Monte Westerfield, Paula M. Mabee

published 20 May 2010

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Phenex: Ontological Annotation of Phenotypic Diversity

James P. Balhoff, Wasila M. Dahdul, Cartik R. Kothari, Hilmar Lapp, John G. Lundberg, Paula Mabee, Peter E. Midford, Monte Westerfield, Todd J. Vision

published 05 May 2010

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Zsyntax: A Formal Language for Molecular Biology with Projected Applications in Text Mining and Biological Prediction

Giovanni Boniolo, Marcello D'Agostino, Pier Paolo Di Fiore

published 03 Mar 2010

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Transcriptional Analysis of Fracture Healing and the Induction of Embryonic Stem Cell–Related Genes

Manish Bais, Jody McLean, Paola Sebastiani, Megan Young, Nathan Wigner, Temple Smith, Darrell N. Kotton, Thomas A. Einhorn, Louis C. Gerstenfeld

published 05 May 2009

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Biological Process Linkage Networks

Dikla Dotan-Cohen, Stan Letovsky, Avraham A. Melkman, Simon Kasif

published 23 Apr 2009

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Width of Gene Expression Profile Drives Alternative Splicing

Daniel Wegmann, Isabelle Dupanloup, Laurent Excoffier

published 31 Oct 2008

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A New Perspective on Transcriptional System Regulation (TSR): Towards TSR Profiling

Rudolf S. N. Fehrmann, Hendrik J. M. de Jonge, Arja ter Elst, André de Vries, Anne G. P. Crijns, Alida C. Weidenaar, Frans Gerbens, Steven de Jong, Ate G. J. van der Zee, Elisabeth G. E. de Vries, Willem A. Kamps, Robert M. W. Hofstra, Gerard J. te Meerman, Eveline S. J. M. de Bont

published 20 Feb 2008

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Gene-Centric Characteristics of Genome-Wide Association Studies

Changzheng Dong, Ziliang Qian, Peilin Jia, Ying Wang, Wei Huang, Yixue Li

published 05 Dec 2007

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Deductive Biocomputing

Jeff Shrager, Richard Waldinger, Mark Stickel, J.P. Massar

published 04 Apr 2007

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