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Nucleotide sequencing

Complete Nucleotide Sequence of CTX-M-15-Plasmids from Clinical Escherichia coli Isolates: Insertional Events of Transposons and Insertion Sequences

Annemieke Smet, Filip Van Nieuwerburgh, Tom T. M. Vandekerckhove, An Martel, Dieter Deforce, Patrick Butaye, Freddy Haesebrouck

published 18 Jun 2010

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Nucleic Acid Template and the Risk of a PCR-Induced HIV-1 Drug Resistance Mutation

Vici Varghese, Elijah Wang, Farbod Babrzadeh, Michael H. Bachmann, Rajin Shahriar, Tommy Liu, Svetlana Jean M. Mappala, Baback Gharizadeh, W. Jeffrey Fessel, David Katzenstein, Seble Kassaye, Robert W. Shafer

published 07 Jun 2010

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MiR-RACE, a New Efficient Approach to Determine the Precise Sequences of Computationally Identified Trifoliate Orange (Poncirus trifoliata) MicroRNAs

Changnian Song, Jinggui Fang, Chen Wang, Lei Guo, Kibet Korir Nicholas, Zhengqiang Ma

published 07 Jun 2010

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W-Curve Alignments for HIV-1 Genomic Comparisons

Douglas J. Cork, Steven Lembark, Sodsai Tovanabutra, Merlin L. Robb, Jerome H. Kim

published 01 Jun 2010

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Initial Fitness Recovery of HIV-1 Is Associated with Quasispecies Heterogeneity and Can Occur without Modifications in the Consensus Sequence

Antonio V. Bordería, Ramon Lorenzo-Redondo, Maria Pernas, Concepción Casado, Tamara Alvaro, Esteban Domingo, Cecilio Lopez-Galindez

published 26 Apr 2010

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Dinucleotide Weight Matrices for Predicting Transcription Factor Binding Sites: Generalizing the Position Weight Matrix

Rahul Siddharthan

published 22 Mar 2010

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Metagenomes from High-Temperature Chemotrophic Systems Reveal Geochemical Controls on Microbial Community Structure and Function

William P. Inskeep, Douglas B. Rusch, Zackary J. Jay, Markus J. Herrgard, Mark A. Kozubal, Toby H. Richardson, Richard E. Macur, Natsuko Hamamura, Ryan deM. Jennings, Bruce W. Fouke, Anna-Louise Reysenbach, Frank Roberto, Mark Young, Ariel Schwartz, Eric S. Boyd, Jonathan H. Badger, Eric J. Mathur, Alice C. Ortmann, Mary Bateson, Gill Geesey, Marvin Frazier

published 19 Mar 2010

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Antimicrobial Resistance, Class 1 Integrons, and Genomic Island 1 in Salmonella Isolates from Vietnam

An T. T. Vo, Engeline van Duijkeren, Wim Gaastra, Ad C. Fluit

published 26 Feb 2010

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Geographic Structuring of the Plasmodium falciparum Sarco(endo)plasmic Reticulum Ca2+ ATPase (PfSERCA) Gene Diversity

Ronan Jambou, Axel Martinelli, João Pinto, Simonetta Gribaldo, Eric Legrand, Makhtar Niang, Nimol Kim, Lim Pharath, Béatrice Volnay, Marie Therese Ekala, Christiane Bouchier, Thierry Fandeur, Pedro Berzosa, Agustin Benito, Isabel Dinis Ferreira, Cynthia Ferreira, Pedro Paulo Vieira, Maria das Graças Alecrim, Odile Mercereau-Puijalon, Pedro Cravo

published 25 Feb 2010

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Structural Analysis of Biodiversity

Lawrence Sirovich, Mark Y. Stoeckle, Yu Zhang

published 24 Feb 2010

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HIV Drug Resistance Surveillance Using Pooled Pyrosequencing

Hezhao Ji, Nathalie Massé, Shaun Tyler, Ben Liang, Yang Li, Harriet Merks, Morag Graham, Paul Sandstrom, James Brooks

published 17 Feb 2010

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A Complete Mitochondrial Genome Sequence from a Mesolithic Wild Aurochs (Bos primigenius)

Ceiridwen J. Edwards, David A. Magee, Stephen D. E. Park, Paul A. McGettigan, Amanda J. Lohan, Alison Murphy, Emma K. Finlay, Beth Shapiro, Andrew T. Chamberlain, Martin B. Richards, Daniel G. Bradley, Brendan J. Loftus, David E. MacHugh

published 17 Feb 2010

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The DIANA-mirExTra Web Server: From Gene Expression Data to MicroRNA Function

Panagiotis Alexiou, Manolis Maragkakis, Giorgio L. Papadopoulos, Victor A. Simmosis, Lin Zhang, Artemis G. Hatzigeorgiou

published 11 Feb 2010

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