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Nucleotide sequencing

Modeling SARS-CoV-2 nucleotide mutations as a stochastic process

Maverick Lim Kai Rong, Ercan Engin Kuruoglu, Wai Kin Victor Chan

published 28 Apr 2023

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Wastewater surveillance of SARS-CoV-2 genomic populations on a country-wide scale through targeted sequencing

Florencia Cancela, Natalia Ramos, Davida S. Smyth, Claudia Etchebehere, Mabel Berois, Jesica Rodríguez, Caterina Rufo, Alicia Alemán, Liliana Borzacconi, Julieta López, Elizabeth González, Germán Botto, Starla G. Thornhill, Santiago Mirazo, Mónica Trujillo

published 21 Apr 2023

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Phylogenetic trees of closely related bacterial species and subspecies based on frequencies of short nucleotide sequences

Yoshio Nakano, Yusaku Domon, Kenji Yamagishi

published 20 Apr 2023

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Designed and validated novel allele-specific primer to differentiate Kernel Row Number (KRN) in tropical field corn

Ganapati Mukri, Kumari Shilpa, R. N. Gadag, Jayant S. Bhat, Chandu Singh, Navin C. Gupta, Chandra Prabha, Sahana Police Patil

published 12 Apr 2023

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Rapid genomic surveillance of SARS-CoV-2 in a dense urban community of Kathmandu Valley using sewage samples

Rajindra Napit, Prajwol Manandhar, Ashok Chaudhary, Bishwo Shrestha, Ajit Poudel, Roji Raut, Saman Pradhan, Samita Raut, Pragun G. Rajbhandari, Anupama Gurung, Rajesh M. Rajbhandari, Sameer M. Dixit, Jessica S. Schwind, Christine K. Johnson, Jonna K. Mazet, Dibesh B. Karmacharya

published 30 Mar 2023

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Clonal isolates of Treponema pallidum subsp. pallidum Nichols provide evidence for the occurrence of microevolution during experimental rabbit infection and in vitro culture

Diane G. Edmondson, Bridget D. De Lay, Blake M. Hanson, Lindsay E. Kowis, Steven J. Norris

published 14 Mar 2023

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Role of ribosome recycling factor in natural termination and translational coupling as a ribosome releasing factor

Yoshio Inokuchi, Fabio Quaglia, Akikazu Hirashima, Yoshihiro Yamamoto, Hideko Kaji, Akira Kaji

published 24 Feb 2023

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Mitogenome of the leaf-footed bug Notobitus montanus (Hemiptera: Coreidae) and a phylogenetic analysis of Coreoidea

Xiaoke Tian, Yongqin Li, Qin Chen, Qianquan Chen

published 10 Feb 2023

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Characterization of SpsQ from Staphylococcus pseudintermedius as an affinity chromatography ligand for canine therapeutic antibodies

Hiroto Takeuchi, Chie Nakajima, Satoru Konnai, Naoya Maekawa, Tomohiro Okagawa, Masaru Usui, Yutaka Tamura, Yasuhiko Suzuki, Shiro Murata, Kazuhiko Ohashi

published 26 Jan 2023

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Phylogenetic analysis based on whole genome sequence of bovine leukemia virus in cattle under 3 years old with enzootic bovine leukosis

Masaki Maezawa, Yuki Fujii, Masataka Akagami, Junko Kawakami, Hisashi Inokuma

published 25 Jan 2023

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Comparison between relative and absolute quantitative real-time PCR applied to single-cell analyses: Transcriptional levels in a key neuron for long-term memory in the pond snail

Dai Hatakeyama, Nozomi Chikamoto, Kanta Fujimoto, Takashi Kitahashi, Etsuro Ito

published 12 Dec 2022

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Nanopore sequencing data analysis using Microsoft Azure cloud computing service

Linh Truong, Felipe Ayora, Lloyd D’Orsogna, Patricia Martinez, Dianne De Santis

published 02 Dec 2022

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Genetic characterization of a novel pheasant-origin orthoreovirus using Next-Generation Sequencing

Yi Tang, Haiyang Yu, Xiaoning Jiang, Endong Bao, Dong Wang, Huaguang Lu

published 21 Nov 2022

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